RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 CD8BP10966 210 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 ZNF12P17014 697 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 PYCR1P32322 319 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 TSPAN7P41732 249 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 HTR3AP46098 478 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 PPP5CP53041 499 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 GGTLC2Q14390 218 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 RGS21Q2M5E4 152 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 SLC35D3Q5M8T2 416 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 VASNQ6EMK4 673 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 SLC35F2Q8IXU6 374 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 SLC25A46Q96AG3 418 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 TSPAN32Q96QS1 320 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 NPAS1Q99742 590 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 SRA1Q9HD15 236 aaKnown RBP13.84□□□□□ -0.19
BEST1-204ENST00000524926 TAS2R5Q9NYW4 299 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 PPP4R1LQ9P1A2 415 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 ZNF346Q9UL40 294 aaKnown RBP13.84□□□□□ -0.19
BEST1-204ENST00000524926 NOX1Q9Y5S8 564 aa13.84□□□□□ -0.19
BEST1-204ENST00000524926 H7C1C5 153 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 GABRPO00591 440 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 MAGEB4O15481 346 aaPredicted RBP13.83□□□□□ -0.19
BEST1-204ENST00000524926 SELENOFO60613 162 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 PRKCAP17252 672 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 LCN6P62502 163 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 HNRNPA0Q13151 305 aaKnown RBP13.83□□□□□ -0.19
BEST1-204ENST00000524926 GPR50Q13585 617 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 KRR1Q13601 381 aaKnown RBP13.83□□□□□ -0.19
BEST1-204ENST00000524926 PLA2G2CQ5R387 149 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 ARL9Q6T311 187 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 LYPD4Q6UWN0 246 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 ARSKQ6UWY0 536 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 LYPD8Q6UX82 237 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 ZNF517Q6ZMY9 492 aaPredicted RBP13.83□□□□□ -0.19
BEST1-204ENST00000524926 VASH1Q7L8A9 365 aaPredicted RBP13.83□□□□□ -0.19
BEST1-204ENST00000524926 MARCH9Q86YJ5 346 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 ARIH2OSQ8N7S6 290 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 OR2Y1Q8NGV0 311 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 ALG12Q9BV10 488 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 ZMIZ1Q9ULJ6 1067 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 HS3ST3B1Q9Y662 390 aa13.83□□□□□ -0.19
BEST1-204ENST00000524926 A0A075B6Q4 140 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 CASKO14936 926 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 MAGEB3O15480 346 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 NPIPB7O75200 414 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 GLCEO94923 617 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 OR6A2O95222 327 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 AHSA1O95433 338 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 TXNDC12O95881 172 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 PLGP00747 810 aaPredicted RBP13.83□□□□□ -0.2
BEST1-204ENST00000524926 TP53I3Q53FA7 332 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 EMC4Q5J8M3 183 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 OR5J2Q8NH18 312 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 SNX33Q8WV41 574 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 ST8SIA1Q92185 356 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 COQ7Q99807 217 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 SMURF1Q9HCE7 757 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 PCDHGB6Q9Y5F9 930 aa13.83□□□□□ -0.2
BEST1-204ENST00000524926 RALGAPA1Q6GYQ0 2036 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 TAF4O00268 1085 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 ARHGEF9O43307 516 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 ITGA10O75578 1167 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 STK17BO94768 372 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 FBXO45P0C2W1 286 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 COX6A1P12074 109 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 CD40LGP29965 261 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 GRPRP30550 384 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 FOLR3P41439 243 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 SUMO3P55854 103 aaPredicted RBP13.82□□□□□ -0.2
BEST1-204ENST00000524926 CLDN6P56747 220 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 IFITM3Q01628 133 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 ZNF45Q02386 682 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 SLC3A1Q07837 685 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 IL10RAQ13651 578 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 SF3A2Q15428 464 aaKnown RBP13.82□□□□□ -0.2
BEST1-204ENST00000524926 MESTQ5EB52 335 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 SPANXN2Q5MJ10 180 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 TUBA3EQ6PEY2 450 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 RPTNQ6XPR3 784 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 PARP16Q8N5Y8 322 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 STK35Q8TDR2 534 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 SPACA9Q96E40 222 aaPredicted RBP13.82□□□□□ -0.2
BEST1-204ENST00000524926 ZNF700Q9H0M5 742 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 SDHAF3Q9NRP4 125 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 OR2T1O43869 369 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 SLC25A1P53007 311 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 TAS2R43P59537 309 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 E2F1Q01094 437 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 EXT1Q16394 746 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 SGCBQ16585 318 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 NTRK2Q16620 822 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 SLC6A19Q695T7 634 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 GPR139Q6DWJ6 353 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 RAB11FIP2Q7L804 512 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 ZNF511Q8NB15 262 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 NEIL3Q8TAT5 605 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 MED18Q9BUE0 208 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 STRADBQ9C0K7 418 aa13.82□□□□□ -0.2
BEST1-204ENST00000524926 MARCH7Q9H992 704 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms