RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 A0A1W2PP55 124 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 DUXAA6NLW8 204 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 OGG1O15527 345 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 FGF17O60258 216 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 RNGTTO60942 597 aaKnown RBP12.06□□□□□ -0.48
CAPN1-202ENST00000524773 CDC123O75794 336 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-202ENST00000524773 CSN2P05814 226 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 NID1P14543 1247 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 IFNGR1P15260 489 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 IL32P24001 234 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 TAS2R20P59543 309 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 DUSP8Q13202 625 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 ALG10BQ5I7T1 473 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 ZNF626Q68DY1 528 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 ZNF660Q6AZW8 331 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-202ENST00000524773 GSG1LQ6UXU4 331 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 RNF44Q7L0R7 432 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 TMED4Q7Z7H5 227 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 PAQR7Q86WK9 346 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 ZNF619Q8N2I2 560 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 BVESQ8NE79 360 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 OR51S1Q8NGJ8 323 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 OR4C16Q8NGL9 310 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 DUSP19Q8WTR2 217 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 TNFAIP8L1Q8WVP5 186 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 S100A16Q96FQ6 103 aaKnown RBP12.06□□□□□ -0.48
CAPN1-202ENST00000524773 ZNF764Q96H86 408 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-202ENST00000524773 RADILQ96JH8 1075 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 IFT46Q9NQC8 304 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 OPN4Q9UHM6 478 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 ANKRD20A5PA0PJZ0 165 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 TMEM72A0PK05 275 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 HRKO00198 91 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 PPM1AP35813 382 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 IKZF1Q13422 519 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 HACD4Q5VWC8 232 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 TFAP2EQ6VUC0 442 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 SFTPA2Q8IWL1 248 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 MRPS24Q96EL2 167 aaKnown RBP12.06□□□□□ -0.48
CAPN1-202ENST00000524773 PRSS16Q9NQE7 514 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 CPNE7Q9UBL6 633 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 FBXO4Q9UKT5 387 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 RNF215Q9Y6U7 377 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 V9GY05 133 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 WDR87Q6ZQQ6 2873 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 A8MXK9 166 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 ZNF879B4DU55 563 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 BLOC1S5-TXNDC5H3BN57 136 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 AIPO00170 330 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 CTSVO60911 334 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 HIST1H2ABP04908 130 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 APEHP13798 732 aaKnown RBP12.05□□□□□ -0.48
CAPN1-202ENST00000524773 GABRA1P14867 456 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 MST1P26927 711 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 RPL35P42766 123 aaKnown RBP12.05□□□□□ -0.48
CAPN1-202ENST00000524773 AKR1D1P51857 326 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 TRAM1Q15629 374 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 C4orf46Q504U0 113 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 TMPRSS11FQ6ZWK6 438 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 HIST3H2AQ7L7L0 130 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 BIVMQ86UB2 503 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 HIST1H2ACQ93077 130 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 PPP1R14AQ96A00 147 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 MOAP1Q96BY2 351 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 PTDSS2Q9BVG9 487 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 FAM117AQ9C073 453 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 WDR13Q9H1Z4 485 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 SRA1Q9HD15 236 aaKnown RBP12.05□□□□□ -0.48
CAPN1-202ENST00000524773 TAS2R5Q9NYW4 299 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 CCSO14618 274 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 SLC31A1O15431 190 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 GIPP09681 153 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-202ENST00000524773 DRD3P35462 400 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 RAG2P55895 527 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 FAM69AQ5T7M9 428 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 PRAMEF8Q5VWM4 474 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 PRAMEF7Q5VXH5 474 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 OR2L13Q8N349 312 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 RAB42Q8N4Z0 105 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 ZNF350Q9GZX5 532 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 MPDZO75970 2070 aa12.05□□□□□ -0.48
CAPN1-202ENST00000524773 EDDM13A0A1B0GTR0 161 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 PRICKLE3O43900 615 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-202ENST00000524773 SDC3O75056 442 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 SERPINA3P01011 423 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 IFNA16P05015 189 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 CTSBP07858 339 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 PON3Q15166 354 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 LIN54Q6MZP7 749 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 STAC2Q6ZMT1 411 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 ZNF765Q7L2R6 523 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 ZNF761Q86XN6 746 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-202ENST00000524773 FAM219AQ8IW50 185 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 OR51D1Q8NGF3 324 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 SUSD6Q92537 303 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 SEC22AQ96IW7 307 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 ZNF75AQ96N20 296 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 TMEM106CQ9BVX2 250 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 SLC7A5P2Q9GIP4 190 aa12.04□□□□□ -0.48
CAPN1-202ENST00000524773 TMEM27Q9HBJ8 222 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms