RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ZNF14P17017 642 aaPredicted RBP11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 CAPZA2P47755 286 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 P2RY4P51582 365 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 FOXA1P55317 472 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 IMPG1Q17R60 797 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 TRMT5Q32P41 509 aaKnown RBP11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 TMEM154Q6P9G4 183 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 OLIG3Q7RTU3 272 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 EPHX4Q8IUS5 362 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 CCDC36Q8IYA8 594 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 LINC01006Q8NI28 216 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 KIF18AQ8NI77 898 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 ZNF75AQ96N20 296 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 TMEM237Q96Q45 408 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 MRI1Q9BV20 369 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 CHIAQ9BZP6 476 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 KCNF1Q9H3M0 494 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 TNFRSF19Q9NS68 423 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 TAAR3PQ9P1P4 343 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 OSGIN1Q9UJX0 560 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 SNX12Q9UMY4 172 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 FAF1Q9UNN5 650 aaPredicted RBP11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 NUP214P35658 2090 aaPredicted RBP11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 LIPT2A6NK58 231 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 FCMRO60667 390 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 ERLIN1O75477 346 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 KRT16P08779 473 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 CSF1P09603 554 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 PKNOX1P55347 436 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 TP53BP2Q13625 1128 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 CEACAM7Q14002 265 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 KIAA0040Q15053 153 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 UAP1Q16222 522 aaPredicted RBP11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 MAPK14Q16539 360 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 HFEQ30201 348 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 GKAP1Q5VSY0 366 aaPredicted RBP11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 TRIM46Q7Z4K8 759 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 OR52E2Q8NGJ4 325 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 ZNF837Q96EG3 531 aaPredicted RBP11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 OR7D2Q96RA2 312 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 SLC30A2Q9BRI3 323 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 MARCH7Q9H992 704 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 GPR35Q9HC97 309 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 SLC6A13Q9NSD5 602 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 MKLN1Q9UL63 735 aa11.72□□□□□ -0.53
NKX3-1-202ENST00000523261 ISPDA4D126 451 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 CLPTM1O96005 669 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 HLA-HP01893 362 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 OPN1MWP04001 364 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 GPIP06744 558 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 OPN1MW2P0DN77 364 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 OPN1MW3P0DN78 364 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 HTR3AP46098 478 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 IDH2P48735 452 aaKnown RBP11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 CCT3P49368 545 aaKnown RBP11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 PLAURQ03405 335 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 LCP2Q13094 533 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 OR7A5Q15622 319 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 CEACAM16Q2WEN9 425 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 DEFB112Q30KQ8 113 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 FAM205BPQ63HN1 556 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 AP1ARQ63HQ0 302 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 TMEM225Q6GV28 225 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 CMIPQ8IY22 773 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 OR56A1Q8NGH5 318 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 OR5D16Q8NGK9 328 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 TSPAN32Q96QS1 320 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 AURKAIP1Q9NWT8 199 aaPredicted RBP11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 SLC35A3Q9Y2D2 325 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 STK38LQ9Y2H1 464 aa11.71□□□□□ -0.53
NKX3-1-202ENST00000523261 IGLV3-9A0A075B6K5 115 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 AGAP5A6NIR3 686 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 FRS3O43559 492 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 SEC22BO75396 215 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 VAMP5O95183 116 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 PTMSP20962 102 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 CDC25BP30305 580 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 MAGEA4P43358 317 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 POLR2HP52434 150 aaKnown RBP11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 GALK2Q01415 458 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 PAX8Q06710 450 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 GSG1Q2KHT4 349 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 PRAMEF8Q5VWM4 474 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 PRAMEF7Q5VXH5 474 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 CLHC1Q8NHS4 586 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 PSMA8Q8TAA3 256 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 SNX33Q8WV41 574 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 DCAKDQ8WVC6 231 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 PPP1R14AQ96A00 147 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 WWC2-AS2Q96NR7 200 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 TSSK3Q96PN8 268 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 CCT7Q99832 543 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 DPH5Q9H2P9 285 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 SAP30LQ9HAJ7 183 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 GPR160Q9UJ42 338 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 PPP2R2CQ9Y2T4 447 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 CCL27Q9Y4X3 112 aa11.7□□□□□ -0.54
NKX3-1-202ENST00000523261 TET2Q6N021 2002 aaPredicted RBP11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 AP3D1O14617 1153 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 TPD52L2O43399 206 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms