RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 RNF11Q9Y3C5 154 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 HSPB11Q9Y547 144 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 KLK4Q9Y5K2 254 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 OAS3Q9Y6K5 1087 aaKnown RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 PCDH15Q96QU1 1955 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 C20orf202A1L168 122 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 HMX2A2RU54 273 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF891A8MT65 544 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-216ENST00000523088 SIAH2O43255 324 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 GDF9O60383 454 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 TNFSF15O95150 251 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 MED26O95402 600 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 TTC4O95801 387 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 F13BP05160 661 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 CD5P06127 495 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 ANXA3P12429 323 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 CD44P16070 742 aaKnown RBP6.92□□□□□ -1.3
HDAC3-216ENST00000523088 TPH1P17752 444 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 BMP7P18075 431 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 COMTP21964 271 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 PSMB5P28074 263 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 HOXD9P28356 352 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-216ENST00000523088 KIR3DL1P43629 444 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 CRYBA4P53673 196 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 MLF1P58340 268 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF616Q08AN1 781 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 CDH18Q13634 790 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 RBBP7Q16576 425 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 ISXQ2M1V0 245 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 DPCR1Q3MIW9 517 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 SLC36A2Q495M3 483 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 RFTN2Q52LD8 501 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-216ENST00000523088 SYPL2Q5VXT5 272 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 FCRLAQ7L513 359 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 BHLHA9Q7RTU4 235 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 NAA40Q86UY6 237 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 TMEFF1Q8IYR6 380 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 C1orf87Q8N0U7 546 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM156Q8N614 296 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 EXD3Q8N9H8 876 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 OR5L1Q8NGL2 311 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 OR51F2Q8NH61 342 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 NFKBIDQ8NI38 313 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 LMO3Q8TAP4 145 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 PIGXQ8TBF5 258 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 ABHD3Q8WU67 409 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 STYXQ8WUJ0 223 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 ASB13Q8WXK3 278 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 WBP2Q969T9 261 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 ZBED6CLQ96FA7 236 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF419Q96HQ0 510 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-216ENST00000523088 POM121L2Q96KW2 1035 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 HSPA12BQ96MM6 686 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 UBL7Q96S82 380 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-216ENST00000523088 CD180Q99467 661 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 CMSS1Q9BQ75 279 aaKnown RBP6.92□□□□□ -1.3
HDAC3-216ENST00000523088 ZSWIM1Q9BR11 485 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 DPH1Q9BZG8 443 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 PTGES2Q9H7Z7 377 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 MSL2Q9HCI7 577 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 FBXL12Q9NXK8 326 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 KCMF1Q9P0J7 381 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 LRIT1Q9P2V4 623 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 SEC14L3Q9UDX4 400 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 PADI1Q9ULC6 663 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 RNF6Q9Y252 685 aa6.92□□□□□ -1.3
HDAC3-216ENST00000523088 ADAMTS9Q9P2N4 1935 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 TP53BP1Q12888 1972 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM8BA6NDV4 472 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 MYO1GB0I1T2 1018 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 C9J4A7 227 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 TEX46H3BTG2 121 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 K7ERU9 68 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 AP4M1O00189 453 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CBX4O00257 560 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CXCR6O00574 342 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF185O15231 689 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF208O43345 1280 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 PPIHO43447 177 aaKnown RBP6.91□□□□□ -1.3
HDAC3-216ENST00000523088 TGOLN2O43493 480 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 RAD51DO75771 328 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ATG12O94817 140 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 WDR47O94967 919 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CER1O95813 267 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CBX7O95931 251 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CST4P01036 141 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 PDYNP01213 254 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 PF4P02776 101 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CFIP05156 583 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CRYBA1P05813 215 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CHRM2P08172 466 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 OR10J4P0C629 311 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF883P0CG24 379 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ENGP17813 658 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 AGAP20933 346 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 EPHA1P21709 976 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 SLC2A5P22732 501 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 LHCGRP22888 699 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms