RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 IRF3Q14653 427 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 OR1C1Q15619 314 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 TBCEQ15813 527 aaPredicted RBP13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 SGCBQ16585 318 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 TMEM44Q2T9K0 475 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 TBC1D25Q3MII6 688 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 ANKDD1AQ495B1 522 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 GLYR1Q49A26 553 aaPredicted RBP13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 GPR107Q5VW38 600 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 GID4Q8IVV7 300 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 ZPLD1Q8TCW7 415 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 NMNAT3Q96T66 252 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 TUBA1CQ9BQE3 449 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 CLEC2DQ9UHP7 191 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 KLHL21Q9UJP4 597 aa13.92□□□□□ -0.18
CTNNA1-236ENST00000522792 A0A1W2PNR3 127 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 LRRC3CA6NJW4 275 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 ARPC3O15145 178 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 RNF13O43567 381 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 ZIC3O60481 467 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 OR6A2O95222 327 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 RFPL3SP0C7P2 107 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 PAICSP22234 425 aaKnown RBP13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 GTF2E2P29084 291 aaKnown RBP13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 MYBPHQ13203 477 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 KLHL22Q53GT1 634 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 MEPCEQ7L2J0 689 aaKnown RBP13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 FAM122BQ7Z309 247 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 KDM8Q8N371 416 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 OR4F15Q8NGB8 312 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 MFSD8Q8NHS3 518 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 TSPAN32Q96QS1 320 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 OR5B2Q96R09 309 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 CDCA4Q9BXL8 241 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 NDEL1Q9GZM8 345 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 WARS2Q9UGM6 360 aaKnown RBP13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 SLC6A5Q9Y345 797 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 SPIN1Q9Y657 262 aaPredicted RBP13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 PTPRZ1P23471 2315 aaPredicted RBP13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 CELSR3Q9NYQ7 3312 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 PLPP3O14495 311 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 RAB36O95755 333 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 CNR1P21554 472 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 ADH6P28332 368 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 RAB40BQ12829 278 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 SELENBP1Q13228 472 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 BORAQ6PGQ7 559 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 PAQR6Q6TCH4 344 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 GTPBP8Q8N3Z3 284 aaPredicted RBP13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 DGCR14Q96DF8 476 aaKnown RBP13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 POTEKPQ9BYX7 375 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 NAA50Q9GZZ1 169 aaKnown RBP13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 MRPL39Q9NYK5 338 aaKnown RBP13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 GRHPRQ9UBQ7 328 aa13.91□□□□□ -0.18
CTNNA1-236ENST00000522792 MED13Q9UHV7 2174 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 CCDC182A6NF36 153 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 LIPT2A6NK58 231 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 SDHAP31040 664 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 MAP2K6P52564 334 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 CNPY1Q3B7I2 92 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 TMEM176BQ3YBM2 270 aaPredicted RBP13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 AGAP7PQ5VUJ5 663 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 UBE2UQ5VVX9 321 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 LEG1Q6P5S2 330 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 YRDCQ86U90 279 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 NPEPL1Q8NDH3 523 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 OR51L1Q8NGJ5 315 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 OR51G2Q8NGK0 314 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 OR6S1Q8NH40 331 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 SMPDL3BQ92485 455 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 KISS1RQ969F8 398 aaPredicted RBP13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 AGAP4Q96P64 663 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 INIPQ9NRY2 104 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 MRPS18AQ9NVS2 196 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 ZNF346Q9UL40 294 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 DIMT1Q9UNQ2 313 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 OR2M5A3KFT3 312 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 OR6C68A6NDL8 312 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 H7C1C5 153 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 IDH3BO43837 385 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 AKR7A3O95154 331 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 SLC2A5P22732 501 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 TTKP33981 857 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 ATP6V1E1P36543 226 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 RFC3P40938 356 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 CDKN2AP42771 156 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 CCL11P51671 97 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 LCN6P62502 163 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 CDC20Q12834 499 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 MED22Q15528 200 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 SYT6Q5T7P8 510 aaPredicted RBP13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 JAZF1Q86VZ6 243 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 C9orf43Q8TAL5 461 aaPredicted RBP13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 NMD3Q96D46 503 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 OR5M11Q96RB7 305 aa13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 RSL24D1Q9UHA3 163 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-236ENST00000522792 TRAPPC6AO75865 159 aa13.89□□□□□ -0.19
CTNNA1-236ENST00000522792 MRPL3P09001 348 aaKnown RBP13.89□□□□□ -0.19
CTNNA1-236ENST00000522792 HSMCR30P0CW71 290 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms