RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 SSU72Q9NP77 194 aaKnown RBP12.91□□□□□ -0.34
PRKDC-204ENST00000521331 LRP5LA4QPB2 252 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 TMEM229AB2RXF0 380 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 RFXANKO14593 260 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 TM9SF1O15321 606 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 AHSA1O95433 338 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 GSNP06396 782 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 ALDOCP09972 364 aaKnown RBP12.9□□□□□ -0.34
PRKDC-204ENST00000521331 CBR1P16152 277 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 ZNF43P17038 809 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 APEX1P27695 318 aaKnown RBP12.9□□□□□ -0.34
PRKDC-204ENST00000521331 GTF2E2P29084 291 aaKnown RBP12.9□□□□□ -0.34
PRKDC-204ENST00000521331 IL12AP29459 219 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 SRP14P37108 136 aaKnown RBP12.9□□□□□ -0.34
PRKDC-204ENST00000521331 HGFACQ04756 655 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 MAPK11Q15759 364 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 CCDC36Q8IYA8 594 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 IL17RDQ8NFM7 739 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 DOK1Q99704 481 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 DYNLRB1Q9NP97 96 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 ZNF232Q9UNY5 417 aa12.9□□□□□ -0.34
PRKDC-204ENST00000521331 ZNF443Q9Y2A4 671 aaPredicted RBP12.9□□□□□ -0.34
PRKDC-204ENST00000521331 LILRA1O75019 489 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 SLC43A1O75387 559 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 BCHEP06276 602 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 PNMTP11086 282 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 PCMT1P22061 227 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 THBS4P35443 961 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 ARR3P36575 388 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 CLDN17P56750 224 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 VSNL1P62760 191 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 ARF1P84077 181 aaKnown RBP12.89□□□□□ -0.35
PRKDC-204ENST00000521331 SPATA21Q7Z572 469 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 ZNF786Q8N393 782 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 CLIP4Q8N3C7 705 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 SVOPLQ8N434 492 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 SPATA9Q9BWV2 254 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 SEC61A2Q9H9S3 476 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 THUMPD1Q9NXG2 353 aaKnown RBP12.89□□□□□ -0.35
PRKDC-204ENST00000521331 TMEFF2Q9UIK5 374 aaPredicted RBP12.89□□□□□ -0.35
PRKDC-204ENST00000521331 IFT52Q9Y366 437 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 GPR45Q9Y5Y3 372 aa12.89□□□□□ -0.35
PRKDC-204ENST00000521331 IGHV2OR16-5A0A0B4J2B6 119 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 TMEM247A6NEH6 219 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 FTCDNL1E5RQL4 147 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 ZNF432O94892 652 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 IL6P05231 212 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 CELA3BP08861 270 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 PRG2P13727 222 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 ETFAP13804 333 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 BGNP21810 368 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 CRATP43155 626 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 MVDP53602 400 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 DSTNP60981 165 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 POU3F1Q03052 451 aaPredicted RBP12.88□□□□□ -0.35
PRKDC-204ENST00000521331 STX3Q13277 289 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 RIN1Q13671 783 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 KRT71Q3SY84 523 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 GPR137CQ8N3F9 429 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 UBASH3BQ8TF42 649 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 AENQ8WTP8 325 aaKnown RBP12.88□□□□□ -0.35
PRKDC-204ENST00000521331 SLC38A5Q8WUX1 472 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 CKAP2Q8WWK9 683 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 SLC35B4Q969S0 331 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 SLC25A36Q96CQ1 311 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 C1orf159Q96HA4 380 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 OXGR1Q96P68 337 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 SNX18Q96RF0 628 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 PTDSS2Q9BVG9 487 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 GPR35Q9HC97 309 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 PNPOQ9NVS9 261 aa12.88□□□□□ -0.35
PRKDC-204ENST00000521331 A0A0G2JPF8 293 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 TMEM129A0AVI4 362 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 HNRNPCL2B2RXH8 293 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 HNRNPCL3B7ZW38 293 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 SDHDO14521 159 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 AIM2O14862 343 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 RGS16O15492 202 aaPredicted RBP12.87□□□□□ -0.35
PRKDC-204ENST00000521331 AKAP8O43823 692 aaKnown RBP12.87□□□□□ -0.35
PRKDC-204ENST00000521331 OR2T1O43869 369 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 HNRNPCL1O60812 293 aaKnown RBP12.87□□□□□ -0.35
PRKDC-204ENST00000521331 FZD7O75084 574 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 ZCCHC18P0CG32 403 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 HNRNPCL4P0DMR1 293 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 IFNGR1P15260 489 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 IL2RGP31785 369 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 RPS5P46782 204 aaKnown RBP12.87□□□□□ -0.35
PRKDC-204ENST00000521331 CDH15P55291 814 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 NPRL3Q12980 569 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 C1DQ13901 141 aaKnown RBP12.87□□□□□ -0.35
PRKDC-204ENST00000521331 DAG1Q14118 895 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 ADRM1Q16186 407 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 ATG16L1Q676U5 607 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 C5orf46Q6UWT4 87 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 SERPINA11Q86U17 422 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 MYPOPQ86VE0 399 aaPredicted RBP12.87□□□□□ -0.35
PRKDC-204ENST00000521331 MEX3DQ86XN8 651 aaKnown RBP12.87□□□□□ -0.35
PRKDC-204ENST00000521331 ZCCHC24Q8N2G6 241 aaKnown RBP12.87□□□□□ -0.35
PRKDC-204ENST00000521331 KDM8Q8N371 416 aa12.87□□□□□ -0.35
PRKDC-204ENST00000521331 PIK3C3Q8NEB9 887 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms