RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RAF1P04049 648 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 ZNF43P17038 809 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 DNASE1P24855 282 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 SELENOPP49908 381 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 NR1H2P55055 460 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 SELENOWP63302 87 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 TIMM23BQ5SRD1 257 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 C9orf135Q5VTT2 229 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 LURAP1LQ8IV03 231 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 C10orf53Q8N6V4 93 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 SCAIQ8N9R8 606 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 ADPRHL1Q8NDY3 354 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 MPP4Q96JB8 637 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 LRRC37BQ96QE4 947 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 ZNF426Q9BUY5 554 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 ASPNQ9BXN1 380 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 OR5H1A6NKK0 313 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 GSTA4O15217 222 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 ATE1O95260 518 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 NQO1P15559 274 aaKnown RBP18.17■□□□□ 0.5
TRIM35-203ENST00000521253 TAS2R41P59536 307 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 LGALS3BPQ08380 585 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 C1DQ13901 141 aaKnown RBP18.17■□□□□ 0.5
TRIM35-203ENST00000521253 KEAP1Q14145 624 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 PPA1Q15181 289 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 NIPAL3Q6P499 406 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 TTC33Q6PID6 262 aaPredicted RBP18.17■□□□□ 0.5
TRIM35-203ENST00000521253 P2RY8Q86VZ1 359 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 POMGNT2Q8NAT1 580 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 CCT8L2Q96SF2 557 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 KCTD14Q9BQ13 255 aaPredicted RBP18.17■□□□□ 0.5
TRIM35-203ENST00000521253 PRSS27Q9BQR3 290 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 SPAG4Q9NPE6 437 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 ROS1P08922 2347 aa18.17■□□□□ 0.5
TRIM35-203ENST00000521253 LOC102725191A0A1B0GVB3 256 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 MS4A18H0YCH9 400 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 KPNA4O00629 521 aaPredicted RBP18.16■□□□□ 0.5
TRIM35-203ENST00000521253 DCTN3O75935 186 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 OR5F1O95221 314 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 HPRP00739 348 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 PLAUP00749 431 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 MT-ATP6P00846 226 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 MPGP29372 298 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 ART1P52961 327 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 CLDN17P56750 224 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 IL1RL1Q01638 556 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 PMS2P3Q13401 168 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 PIN1Q13526 163 aaPredicted RBP18.16■□□□□ 0.5
TRIM35-203ENST00000521253 GABRA6Q16445 453 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 MS4A18Q3C1V0 323 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 OR7E24Q6IFN5 339 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 ZNF704Q6ZNC4 412 aaPredicted RBP18.16■□□□□ 0.5
TRIM35-203ENST00000521253 VTCN1Q7Z7D3 282 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 LZICQ8WZA0 190 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 MUCL1Q96DR8 90 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 MUS81Q96NY9 551 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 TMEM204Q9BSN7 226 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 SLC19A3Q9BZV2 496 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 POLR2J2Q9GZM3 115 aaKnown RBP18.16■□□□□ 0.5
TRIM35-203ENST00000521253 POLR2J3Q9H1A7 115 aaKnown RBP18.16■□□□□ 0.5
TRIM35-203ENST00000521253 UBTD1Q9HAC8 227 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 NGBQ9NPG2 151 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 ARL8BQ9NVJ2 186 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 MRPL39Q9NYK5 338 aaKnown RBP18.16■□□□□ 0.5
TRIM35-203ENST00000521253 RIMS3Q9UJD0 308 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 RCE1Q9Y256 329 aa18.16■□□□□ 0.5
TRIM35-203ENST00000521253 TRAF3IP2O43734 574 aaPredicted RBP18.15■□□□□ 0.5
TRIM35-203ENST00000521253 ZNF432O94892 652 aa18.15■□□□□ 0.5
TRIM35-203ENST00000521253 CH25HO95992 272 aa18.15■□□□□ 0.5
TRIM35-203ENST00000521253 HLA-DOBP13765 273 aa18.15■□□□□ 0.5
TRIM35-203ENST00000521253 ZNF74Q16587 644 aa18.15■□□□□ 0.5
TRIM35-203ENST00000521253 NKAIN4Q8IVV8 208 aa18.15■□□□□ 0.5
TRIM35-203ENST00000521253 ANKS4BQ8N8V4 417 aa18.15■□□□□ 0.5
TRIM35-203ENST00000521253 OR52N5Q8NH56 324 aa18.15■□□□□ 0.5
TRIM35-203ENST00000521253 ALKBH3Q96Q83 286 aaPredicted RBP18.15■□□□□ 0.5
TRIM35-203ENST00000521253 AMBRA1Q9C0C7 1298 aa18.15■□□□□ 0.5
TRIM35-203ENST00000521253 HIVEP1P15822 2718 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 A0A1W2PR80 420 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 OR6C65A6NJZ3 312 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 PLPP3O14495 311 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 UPK3AO75631 287 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 KRT33AO76009 404 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 ZNF682O95780 498 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 NCK1P16333 377 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 CD53P19397 219 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 TGFBR3Q03167 851 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 PUDPQ08623 228 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 ACKR1Q16570 336 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 NCMAPQ5T1S8 102 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 CBLL1Q75N03 491 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 LINGO2Q7L985 606 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 SSX8Q7RTT4 187 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 UEVLDQ8IX04 471 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 C1orf162Q8NEQ5 155 aaPredicted RBP18.14■□□□□ 0.49
TRIM35-203ENST00000521253 OR5J2Q8NH18 312 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 TMEM255BQ8WV15 326 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 MBD6Q96DN6 1003 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 FOXC2Q99958 501 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 ESRP2Q9H6T0 727 aaKnown RBP18.14■□□□□ 0.49
TRIM35-203ENST00000521253 MEPEQ9NQ76 525 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms