RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 GZMMP51124 257 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 PRPS1P60891 318 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 NCALDP61601 193 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 SWT1Q5T5J6 900 aaKnown RBP14.94□□□□□ -0.02
SQLE-205ENST00000521232 NANOGP8Q6NSW7 305 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 NIPAL3Q6P499 406 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 H1FNTQ75WM6 255 aaPredicted RBP14.94□□□□□ -0.02
SQLE-205ENST00000521232 PATL1Q86TB9 770 aaKnown RBP14.94□□□□□ -0.02
SQLE-205ENST00000521232 DTX2Q86UW9 622 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 RANBP3LQ86VV4 465 aaPredicted RBP14.94□□□□□ -0.02
SQLE-205ENST00000521232 GPR32P1Q8NGA4 272 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 OR10A6Q8NH74 314 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 TRMT61AQ96FX7 289 aaKnown RBP14.94□□□□□ -0.02
SQLE-205ENST00000521232 ARHGDIGQ99819 225 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 TRAF4Q9BUZ4 470 aaPredicted RBP14.94□□□□□ -0.02
SQLE-205ENST00000521232 C1QTNF6Q9BXI9 259 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 LINC00470Q9BZP3 86 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 NANOGQ9H9S0 305 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 FGFR1OP2Q9NVK5 253 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 SELENONQ9NZV5 590 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 KLHL14Q9P2G3 628 aa14.94□□□□□ -0.02
SQLE-205ENST00000521232 TRIM64A6NGJ6 449 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 TRIM64BA6NI03 449 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 FAM171A2A8MVW0 826 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 E7EQL1 145 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 ZNF587BE7ETH6 402 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 M0R082 166 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 M0R1B8 84 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 UPK3AO75631 287 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 KRT33AO76009 404 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 GRPRP30550 384 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 CDH11P55287 796 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 CDH12P55289 794 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 CLDN17P56750 224 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 SLC25A3Q00325 362 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 LTBQ06643 244 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 LGALS3BPQ08380 585 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 CYLC2Q14093 348 aaPredicted RBP14.93□□□□□ -0.02
SQLE-205ENST00000521232 MFSD13AQ14CX5 517 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 NRF1Q16656 503 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 TRMT5Q32P41 509 aaKnown RBP14.93□□□□□ -0.02
SQLE-205ENST00000521232 COQ5Q5HYK3 327 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 CGB2Q6NT52 195 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 LINC00114Q6XXX2 140 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 ADPRHL1Q8NDY3 354 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 ZNF417Q8TAU3 575 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 SLC41A3Q96GZ6 507 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 ZNF587Q96SQ5 575 aaPredicted RBP14.93□□□□□ -0.02
SQLE-205ENST00000521232 EPYCQ99645 322 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 MCHR1Q99705 422 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 TMEM43Q9BTV4 400 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 OBP2BQ9NPH6 170 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 SAR1AQ9NR31 198 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 FAIMQ9NVQ4 179 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 RCE1Q9Y256 329 aa14.93□□□□□ -0.02
SQLE-205ENST00000521232 MS4A18H0YCH9 400 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 RPL36A-HNRNPH2H7BZ11 118 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 WNT11O96014 354 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 NPPAP01160 153 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 OPN1SWP03999 348 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 HOXB4P17483 251 aaPredicted RBP14.92□□□□□ -0.02
SQLE-205ENST00000521232 CDH2P19022 906 aaPredicted RBP14.92□□□□□ -0.02
SQLE-205ENST00000521232 PAX7P23759 505 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 PCGF2P35227 344 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 CDKN1AP38936 164 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 KLF10Q13118 480 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 ETFDHQ16134 617 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 VMACQ2NL98 169 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 MS4A18Q3C1V0 323 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 HIKESHIQ53FT3 197 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 INTS11Q5TA45 600 aaKnown RBP14.92□□□□□ -0.02
SQLE-205ENST00000521232 ZNF613Q6PF04 617 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 SLC22A25Q6T423 547 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 CLEC9AQ6UXN8 241 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 CCDC80Q76M96 950 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 LINGO2Q7L985 606 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 DEPDC4Q8N2C3 294 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 ANKK1Q8NFD2 765 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 OR6T1Q8NGN1 323 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 OR1K1Q8NGR3 316 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 RNF217Q8TC41 542 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 GTPBP3Q969Y2 492 aaKnown RBP14.92□□□□□ -0.02
SQLE-205ENST00000521232 LRRC58Q96CX6 371 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 POM121Q96HA1 1249 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 SH3GL1Q99961 368 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 DHRS9Q9BPW9 319 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 ALG2Q9H553 416 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 CCDC134Q9H6E4 229 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 CORINQ9Y5Q5 1042 aa14.92□□□□□ -0.02
SQLE-205ENST00000521232 M0R3H8 397 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 BGLAPP02818 100 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 VIMP08670 466 aaKnown RBP14.91□□□□□ -0.02
SQLE-205ENST00000521232 CD247P20963 164 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 TTKP33981 857 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 SPOCK1Q08629 439 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 C1DQ13901 141 aaKnown RBP14.91□□□□□ -0.02
SQLE-205ENST00000521232 NPTX1Q15818 432 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 TBRG1Q3YBR2 411 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 AGAP6Q5VW22 663 aa14.91□□□□□ -0.02
SQLE-205ENST00000521232 NHLRC1Q6VVB1 395 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms