RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CRYAAP02489 173 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 USF1P22415 310 aaPredicted RBP17.1■□□□□ 0.33
PABPC1-215ENST00000520804 GTF2E2P29084 291 aaKnown RBP17.1■□□□□ 0.33
PABPC1-215ENST00000520804 MRPL19P49406 292 aaKnown RBP17.1■□□□□ 0.33
PABPC1-215ENST00000520804 SH3BGRP55822 239 aaPredicted RBP17.1■□□□□ 0.33
PABPC1-215ENST00000520804 CLDN17P56750 224 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 SNRPD2P62316 118 aaKnown RBP17.1■□□□□ 0.33
PABPC1-215ENST00000520804 ROR2Q01974 943 aaKnown RBP17.1■□□□□ 0.33
PABPC1-215ENST00000520804 C3orf36Q3SXR2 165 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 ANKRD16Q6P6B7 361 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 GOLGA6L1Q8N7Z2 621 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 RSPO3Q9BXY4 272 aaPredicted RBP17.1■□□□□ 0.33
PABPC1-215ENST00000520804 CA10Q9NS85 328 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 TMEM160Q9NX00 188 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 B3GAT1Q9P2W7 334 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 SEC14L4Q9UDX3 406 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 CDC42EP3Q9UKI2 254 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 RCE1Q9Y256 329 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 FKBP7Q9Y680 259 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 ARFGEF3Q5TH69 2177 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 A0A096LPE4 126 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 A0A1W2PPZ6 126 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 RNF212BA8MTL3 300 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 C5orf58C9J3I9 102 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 IGLV1-44P01699 117 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 CECR9P0C854 216 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 FAM157CP0CG43 387 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 IGHV4-31P0DP07 118 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 HOXB1P14653 301 aaPredicted RBP17.09■□□□□ 0.33
PABPC1-215ENST00000520804 ETS2P15036 469 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 ZNF43P17038 809 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 PRKAR1BP31321 381 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 SERPINF1P36955 418 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 TUBA1BP68363 451 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 TUBA4AP68366 448 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 NAAAQ02083 359 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 CYB5R2Q6BCY4 276 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 TUBA1AQ71U36 451 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 FAM169BQ8N8A8 192 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 LSMEM1Q8N8F7 131 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 ANKK1Q8NFD2 765 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 OXGR1Q96P68 337 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 SORCS2Q96PQ0 1159 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 KCNK17Q96T54 332 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 MOV10Q9HCE1 1003 aaKnown RBP17.09■□□□□ 0.33
PABPC1-215ENST00000520804 SLC25A37Q9NYZ2 338 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 RPS6KB2Q9UBS0 482 aa17.09■□□□□ 0.33
PABPC1-215ENST00000520804 VWC2LB2RUY7 222 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 RPL36A-HNRNPH2H7BZ11 118 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 OR2T1O43869 369 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 SLC43A1O75387 559 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 PDE5AO76074 875 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 PDLIM4P50479 330 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 STX1BP61266 288 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 LSM11P83369 360 aaKnown RBP eCLIP17.08■□□□□ 0.32
PABPC1-215ENST00000520804 ADIPOQQ15848 244 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 LRIF1Q5T3J3 769 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 C5orf46Q6UWT4 87 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 FUNDC1Q8IVP5 155 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 MSRB3Q8IXL7 192 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 NFKBIDQ8NI38 313 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 TAAR8Q969N4 342 aa17.08■□□□□ 0.32
PABPC1-215ENST00000520804 REPIN1Q9BWE0 567 aaKnown RBP17.08■□□□□ 0.32
PABPC1-215ENST00000520804 A0A1B0GWA3 101 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 B9A039 149 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 M0R082 166 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 NDUFS8O00217 210 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 AIM2O14862 343 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 POLR3GO15318 223 aaPredicted RBP17.07■□□□□ 0.32
PABPC1-215ENST00000520804 IGKV3-15P01624 115 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 OR4A8P0C604 315 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 ARAFP10398 606 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 ZNF16P17020 682 aaPredicted RBP17.07■□□□□ 0.32
PABPC1-215ENST00000520804 HTR2AP28223 471 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 CALCRP30988 508 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 ARF1P84077 181 aaKnown RBP17.07■□□□□ 0.32
PABPC1-215ENST00000520804 EFNB3Q15768 340 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 GCNT6Q5T4J0 391 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 FAM69AQ5T7M9 428 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 BLOC1S3Q6QNY0 202 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 SLC46A3Q7Z3Q1 461 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 COMTD1Q86VU5 262 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 C10orf111Q8N326 155 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 ZNF417Q8TAU3 575 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 SLC38A4Q969I6 547 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 C7orf26Q96N11 449 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 ZNF587Q96SQ5 575 aaPredicted RBP17.07■□□□□ 0.32
PABPC1-215ENST00000520804 SEC61A2Q9H9S3 476 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 TCF7L2Q9NQB0 619 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 SLAMF8Q9P0V8 285 aa17.07■□□□□ 0.32
PABPC1-215ENST00000520804 FBN3Q75N90 2809 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 MXRA5Q9NR99 2828 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 IGKV1D-42A0A075B6H8 117 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 LOC102725191A0A1B0GVB3 256 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 TGDSO95455 350 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 CBR1P16152 277 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 GRPRP30550 384 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 NR4A2P43354 598 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 GZMKP49863 264 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 CDK6Q00534 326 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms