RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PCDHGB2Q9Y5G2 931 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 A0A087WUJ7 227 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 TMED7-TICAM2A0A0A6YYA0 188 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 IDSB3KWA1 339 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 THY1P04216 161 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 CSN2P05814 226 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 ZGLP1P0C6A0 271 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 CT45A8P0DMV1 189 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 CT45A9P0DMV2 189 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 MTNR1BP49286 362 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 NXPH1P58417 271 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 NR0B2Q15466 257 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 CD226Q15762 336 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 CT45A2Q5DJT8 189 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 OR7E24Q6IFN5 339 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 NCCRP1Q6ZVX7 275 aaPredicted RBP9.29□□□□□ -0.92
MCF2-209ENST00000520602 OR4M1Q8NGD0 313 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 OR2AJ1Q8NGZ0 328 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 C3orf49Q96BT1 292 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 GPER1Q99527 375 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 DIABLOQ9NR28 239 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 NUDT15Q9NV35 164 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 MED11Q9P086 117 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 SLC6A5Q9Y345 797 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 TMED7Q9Y3B3 224 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 UGT2A1Q9Y4X1 527 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 FZD7O75084 574 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 AP3S2P59780 193 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 GPLD1P80108 840 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 RPL18Q07020 188 aaKnown RBP9.28□□□□□ -0.92
MCF2-209ENST00000520602 TATDN3Q17R31 274 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 ESPNLQ6ZVH7 1005 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 LRRC28Q86X40 367 aaPredicted RBP9.28□□□□□ -0.92
MCF2-209ENST00000520602 ULBP3Q9BZM4 244 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 GAREM1Q9H706 876 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 PTGES2Q9H7Z7 377 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 ZNF346Q9UL40 294 aaKnown RBP9.28□□□□□ -0.92
MCF2-209ENST00000520602 BHLHE40O14503 412 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 TP53P04637 393 aaPredicted RBP9.28□□□□□ -0.92
MCF2-209ENST00000520602 YES1P07947 543 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 S1PR1P21453 382 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 DIO1P49895 249 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 PYHIN1Q6K0P9 492 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 FCRLAQ7L513 359 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 C17orf47Q8NEP4 570 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 KTI12Q96EK9 354 aaPredicted RBP9.28□□□□□ -0.92
MCF2-209ENST00000520602 SIGLEC11Q96RL6 698 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 RSPO3Q9BXY4 272 aaPredicted RBP9.28□□□□□ -0.92
MCF2-209ENST00000520602 SRRQ9GZT4 340 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 ELOVL3Q9HB03 270 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 MCCC2Q9HCC0 563 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 ISYNA1Q9NPH2 558 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 LSM2Q9Y333 95 aaKnown RBP9.28□□□□□ -0.92
MCF2-209ENST00000520602 HSPB11Q9Y547 144 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 ZNF593O00488 134 aaPredicted RBP9.28□□□□□ -0.92
MCF2-209ENST00000520602 OR2T1O43869 369 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 NOS1APO75052 506 aaPredicted RBP9.28□□□□□ -0.92
MCF2-209ENST00000520602 CSF3P09919 207 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 UCHL1P09936 223 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 GPR3P46089 330 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 POU3F1Q03052 451 aaPredicted RBP9.28□□□□□ -0.92
MCF2-209ENST00000520602 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.28□□□□□ -0.92
MCF2-209ENST00000520602 PRAMEF20Q5VT98 475 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 LIPNQ5VXI9 398 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 SLC18B1Q6NT16 456 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 LRRN1Q6UXK5 716 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 Q7L0L9 218 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 ZNF227Q86WZ6 799 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 CADM4Q8NFZ8 388 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 FLVCR1-AS1Q8TAF5 88 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 TMEM246Q9BRR3 403 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 FUZQ9BT04 418 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 DUSP23Q9BVJ7 150 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 SNRNP200O75643 2136 aaKnown RBP9.28□□□□□ -0.92
MCF2-209ENST00000520602 PLXNB3Q9ULL4 1909 aa9.28□□□□□ -0.92
MCF2-209ENST00000520602 CHD7Q9P2D1 2997 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 OR6C68A6NDL8 312 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 NOTOA8MTQ0 251 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 GLCEO94923 617 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 RIDAP52758 137 aaKnown RBP9.27□□□□□ -0.92
MCF2-209ENST00000520602 CEBPEQ15744 281 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 GLYR1Q49A26 553 aaPredicted RBP9.27□□□□□ -0.92
MCF2-209ENST00000520602 GLCCI1Q86VQ1 547 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 TPRA1Q86W33 373 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 RDH10Q8IZV5 341 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 OR6N1Q8NGY5 312 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 OR8S1Q8NH09 359 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 MOGAT1Q96PD6 335 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 OR1F2PQ96R84 312 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 ZNF281Q9Y2X9 895 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 BOLA1Q9Y3E2 137 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 RP1P56715 2156 aa9.27□□□□□ -0.92
MCF2-209ENST00000520602 UBE2QL1A1L167 161 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 TLX3O43711 291 aaPredicted RBP9.27□□□□□ -0.93
MCF2-209ENST00000520602 H2BFMP0C1H6 154 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 ACAA2P42765 397 aaKnown RBP9.27□□□□□ -0.93
MCF2-209ENST00000520602 MAGEB1P43366 347 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 PRKXP51817 358 aa9.27□□□□□ -0.93
MCF2-209ENST00000520602 DCDP81605 110 aaKnown RBP9.27□□□□□ -0.93
MCF2-209ENST00000520602 MAB21L1Q13394 359 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms