RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 WISP1O95388 367 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 APEHP13798 732 aaKnown RBP23.4■■□□□ 1.34
COL13A1-213ENST00000520267 ITPKBP27987 946 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 SDHAP31040 664 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 SLC6A8P48029 635 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 CXCL12P48061 93 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 WDR45BQ5MNZ6 344 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 POMZP3Q6PJE2 187 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 SYT9Q86SS6 491 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 GLCCI1Q86VQ1 547 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 OMA1Q96E52 524 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 DNAJA3Q96EY1 480 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 PDCD1LG2Q9BQ51 273 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 SYNDIG1Q9H7V2 258 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 A0A1B0GVC2 190 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 A6NIN4 97 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 NDUFB5O43674 189 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 CPNE3O75131 537 aaKnown RBP23.4■■□□□ 1.34
COL13A1-213ENST00000520267 LCN1P31025 176 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 NR4A2P43354 598 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 WDR74Q6RFH5 385 aaPredicted RBP23.4■■□□□ 1.34
COL13A1-213ENST00000520267 KMT5CQ86Y97 462 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 TRMT10AQ8TBZ6 339 aaKnown RBP23.4■■□□□ 1.34
COL13A1-213ENST00000520267 RNF121Q9H920 327 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 COPS7AQ9UBW8 275 aa23.4■■□□□ 1.34
COL13A1-213ENST00000520267 SLC25A1P53007 311 aa23.39■■□□□ 1.34
COL13A1-213ENST00000520267 SLC29A4Q7RTT9 530 aa23.39■■□□□ 1.34
COL13A1-213ENST00000520267 CCDC74AQ96AQ1 378 aa23.39■■□□□ 1.34
COL13A1-213ENST00000520267 KCNJ15Q99712 375 aa23.39■■□□□ 1.34
COL13A1-213ENST00000520267 C12orf10Q9HB07 376 aa23.39■■□□□ 1.34
COL13A1-213ENST00000520267 TRAV1-2A0A0B4J238 106 aa23.39■■□□□ 1.33
COL13A1-213ENST00000520267 ABCD3P28288 659 aa23.39■■□□□ 1.33
COL13A1-213ENST00000520267 TMPRSS9Q7Z410 1059 aa23.39■■□□□ 1.33
COL13A1-213ENST00000520267 NANOGNBQ7Z5D8 188 aa23.39■■□□□ 1.33
COL13A1-213ENST00000520267 TSPAN32Q96QS1 320 aa23.39■■□□□ 1.33
COL13A1-213ENST00000520267 OR14A2Q96R54 314 aa23.39■■□□□ 1.33
COL13A1-213ENST00000520267 ELF4Q99607 663 aaPredicted RBP23.39■■□□□ 1.33
COL13A1-213ENST00000520267 ZNF768Q9H5H4 540 aaKnown RBP23.39■■□□□ 1.33
COL13A1-213ENST00000520267 RXFP3Q9NSD7 469 aa23.39■■□□□ 1.33
COL13A1-213ENST00000520267 A0A0B4J293 547 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 A0A1W2PQD3 144 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 ALG1L2C9J202 215 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 H7C1C5 153 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 DCTN6O00399 190 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 TXNDC12O95881 172 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 NPR2P20594 1047 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 LCN6P62502 163 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 ATAD3CQ5T2N8 411 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 C1QL3Q5VWW1 255 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 PAMR1Q6UXH9 720 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 TBL1XR1Q9BZK7 514 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 SRA1Q9HD15 236 aaKnown RBP23.38■■□□□ 1.33
COL13A1-213ENST00000520267 SLC22A11Q9NSA0 550 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 RBFOX1Q9NWB1 397 aaKnown RBP23.38■■□□□ 1.33
COL13A1-213ENST00000520267 ZNF221Q9UK13 617 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 LYRM1O43325 122 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 CD1AP06126 327 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 HSF2Q03933 536 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 CCDC58Q4VC31 144 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 MESTQ5EB52 335 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 CEP78Q5JTW2 689 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 COX15Q7KZN9 410 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 ZNF441Q8N8Z8 693 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 FRMD6Q96NE9 622 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 GRHPRQ9UBQ7 328 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 ATXN7L1Q9ULK2 861 aaPredicted RBP23.38■■□□□ 1.33
COL13A1-213ENST00000520267 NPFFR2Q9Y5X5 522 aa23.38■■□□□ 1.33
COL13A1-213ENST00000520267 NUDT14O95848 222 aa23.37■■□□□ 1.33
COL13A1-213ENST00000520267 UCHL1P09936 223 aa23.37■■□□□ 1.33
COL13A1-213ENST00000520267 FAM157BP0CG42 384 aa23.37■■□□□ 1.33
COL13A1-213ENST00000520267 PRKAR1AP10644 381 aa23.37■■□□□ 1.33
COL13A1-213ENST00000520267 CXCR1P25024 350 aa23.37■■□□□ 1.33
COL13A1-213ENST00000520267 TALDO1P37837 337 aa23.37■■□□□ 1.33
COL13A1-213ENST00000520267 QPRTQ15274 297 aa23.37■■□□□ 1.33
COL13A1-213ENST00000520267 ZNF684Q5T5D7 378 aa23.37■■□□□ 1.33
COL13A1-213ENST00000520267 OR5H6Q8NGV6 325 aa23.37■■□□□ 1.33
COL13A1-213ENST00000520267 MRPL48Q96GC5 212 aaKnown RBP23.37■■□□□ 1.33
COL13A1-213ENST00000520267 ZC3HAV1LQ96H79 300 aaKnown RBP23.37■■□□□ 1.33
COL13A1-213ENST00000520267 ST6GAL2Q96JF0 529 aa23.37■■□□□ 1.33
COL13A1-213ENST00000520267 IGHV3-20A0A0C4DH32 117 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 A8MV72 311 aaPredicted RBP23.36■■□□□ 1.33
COL13A1-213ENST00000520267 EIF4E2O60573 245 aaKnown RBP23.36■■□□□ 1.33
COL13A1-213ENST00000520267 KRT8P05787 483 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 MZT2BQ6NZ67 158 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 C7orf57Q8NEG2 295 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 RNF166Q96A37 237 aaPredicted RBP23.36■■□□□ 1.33
COL13A1-213ENST00000520267 KLHDC2Q9Y2U9 406 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 A0A0B4J203 849 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 HMX3A6NHT5 357 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 ARL6IP5O75915 188 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 BGLAPP02818 100 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 HIST1H2ABP04908 130 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 TFPIP10646 304 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 PSKH1P11801 424 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 ATF1P18846 271 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 RBMS1P29558 406 aaKnown RBP23.36■■□□□ 1.33
COL13A1-213ENST00000520267 INPP1P49441 399 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 PNLIPRP2P54317 469 aa23.36■■□□□ 1.33
COL13A1-213ENST00000520267 NANOS3P60323 173 aaKnown RBP23.36■■□□□ 1.33
COL13A1-213ENST00000520267 SF3A2Q15428 464 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms