RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 C16orf47Q6ZP98 133 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-208ENST00000520228 TAGAPQ8N103 731 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 TMEM156Q8N614 296 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 MDS2Q8NDY4 140 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 FAM76AQ8TAV0 307 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 AGR3Q8TD06 166 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 GRHL3Q8TE85 626 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 ZNF721Q8TF20 911 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 C16orf78Q8WTQ4 265 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 C11orf24Q96F05 449 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-208ENST00000520228 SIGLEC12Q96PQ1 595 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 PAIP2Q9BPZ3 127 aaKnown RBP6.19□□□□□ -1.42
SDCBP-208ENST00000520228 PPIL3Q9H2H8 161 aaKnown RBP6.19□□□□□ -1.42
SDCBP-208ENST00000520228 TUBB1Q9H4B7 451 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 TRIM45Q9H8W5 580 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-208ENST00000520228 LIN28AQ9H9Z2 209 aaKnown RBP6.19□□□□□ -1.42
SDCBP-208ENST00000520228 CXorf21Q9HAI6 301 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 LRTM1Q9HBL6 345 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 TMBIM4Q9HC24 238 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 PFDN4Q9NQP4 134 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.19□□□□□ -1.42
SDCBP-208ENST00000520228 ARGLU1Q9NWB6 273 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-208ENST00000520228 C1orf109Q9NX04 203 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 RCC2Q9P258 522 aaKnown RBP6.19□□□□□ -1.42
SDCBP-208ENST00000520228 ERVK-19Q9WJR5 959 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 WBP11Q9Y2W2 641 aaKnown RBP6.19□□□□□ -1.42
SDCBP-208ENST00000520228 YARS2Q9Y2Z4 477 aaKnown RBP6.19□□□□□ -1.42
SDCBP-208ENST00000520228 CCL27Q9Y4X3 112 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 DNAJC15Q9Y5T4 150 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 SNX8Q9Y5X2 465 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 FER1L5A0AVI2 2057 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 HEATR5BQ9P2D3 2071 aa6.19□□□□□ -1.42
SDCBP-208ENST00000520228 PCM1Q15154 2024 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 TMEM120BA0PK00 339 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 ASPDHA6ND91 283 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 OR6C76A6NM76 312 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 TMEM114B3SHH9 223 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 TCP11X1B4DZS4 312 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 J3QR06 171 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 ATP1B1P05026 303 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 SP1P08047 785 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 NT5EP21589 574 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 ABCE1P61221 599 aaKnown RBP6.18□□□□□ -1.42
SDCBP-208ENST00000520228 ZNF763Q0D2J5 394 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 C2orf80Q0P641 193 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 STX3Q13277 289 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 KIAA0040Q15053 153 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 INAQ16352 499 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 PIGGQ5H8A4 983 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 C6orf163Q5TEZ5 329 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 WBP2NLQ6ICG8 309 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 SLC25A25Q6KCM7 469 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 RNF165Q6ZSG1 346 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 Q6ZSR9 355 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 GPALPP1Q8IXQ4 340 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 CYP4Z2PQ8N1L4 340 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 LRRC25Q8N386 305 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-208ENST00000520228 RFLNBQ8N5W9 214 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 BCORP1Q8N888 145 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 TMEM178AQ8NBL3 297 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 OR7G1Q8NGA0 311 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 OR2T11Q8NH01 316 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 CDC26Q8NHZ8 85 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 NUBPLQ8TB37 319 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 TWIST2Q8WVJ9 160 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 EXOSC8Q96B26 276 aaKnown RBP6.18□□□□□ -1.42
SDCBP-208ENST00000520228 TLCD1Q96CP7 247 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 CNRIP1Q96F85 164 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-208ENST00000520228 ZNF681Q96N22 645 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 RASL10BQ96S79 203 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 CCT7Q99832 543 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 TEX12Q9BXU0 123 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 RAD21L1Q9H4I0 556 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 CLMPQ9H6B4 373 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 MYNNQ9NPC7 610 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 SLC35C2Q9NQQ7 365 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 PLSCR4Q9NRQ2 329 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 GIMAP4Q9NUV9 329 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 OLAHQ9NV23 265 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 NKIRAS1Q9NYS0 192 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 ZDHHC2Q9UIJ5 367 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 NTNG1Q9Y2I2 539 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 POLR3HQ9Y535 204 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-208ENST00000520228 UBR5O95071 2799 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-208ENST00000520228 TENM4Q6N022 2769 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 FLNCQ14315 2725 aa6.18□□□□□ -1.42
SDCBP-208ENST00000520228 NBASA2RRP1 2371 aa6.17□□□□□ -1.42
SDCBP-208ENST00000520228 RP1L1Q8IWN7 2480 aaPredicted RBP6.17□□□□□ -1.42
SDCBP-208ENST00000520228 C2orf92A0A1B0GVN3 265 aa6.17□□□□□ -1.42
SDCBP-208ENST00000520228 CYSRT1A8MQ03 144 aa6.17□□□□□ -1.42
SDCBP-208ENST00000520228 LSM1O15116 133 aaKnown RBP6.17□□□□□ -1.42
SDCBP-208ENST00000520228 ADAMDEC1O15204 470 aa6.17□□□□□ -1.42
SDCBP-208ENST00000520228 NME2P1O60361 137 aa6.17□□□□□ -1.42
SDCBP-208ENST00000520228 WDR1O75083 606 aa6.17□□□□□ -1.42
SDCBP-208ENST00000520228 PEX11AO75192 247 aa6.17□□□□□ -1.42
SDCBP-208ENST00000520228 LYPLA1O75608 230 aaPredicted RBP6.17□□□□□ -1.42
SDCBP-208ENST00000520228 OR6B1O95007 311 aa6.17□□□□□ -1.42
SDCBP-208ENST00000520228 CT62P0C5K7 136 aa6.17□□□□□ -1.42
SDCBP-208ENST00000520228 BGNP21810 368 aa6.17□□□□□ -1.42
SDCBP-208ENST00000520228 MPIP34949 423 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms