RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 OR2L13Q8N349 312 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 TMCO5AQ8N6Q1 288 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 SMYD1Q8NB12 490 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF527Q8NB42 609 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 OR7G2Q8NG99 324 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 OR6Y1Q8NGX8 325 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 CLDND2Q8NHS1 167 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 PIGXQ8TBF5 258 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 POC1BQ8TC44 478 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 LRRC8CQ8TDW0 803 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 SLC25A43Q8WUT9 341 aaPredicted RBP4.22□□□□□ -1.73
SDCBP-207ENST00000520168 THOC1Q96FV9 657 aaKnown RBP4.22□□□□□ -1.73
SDCBP-207ENST00000520168 SLC38A2Q96QD8 506 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF300Q96RE9 604 aaPredicted RBP4.22□□□□□ -1.73
SDCBP-207ENST00000520168 GPR22Q99680 433 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF416Q9BWM5 594 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 RACGAP1Q9H0H5 632 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 MYLK2Q9H1R3 596 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 MS4A5Q9H3V2 200 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 SERHL2Q9H4I8 314 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 ALG9Q9H6U8 611 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 ANKRA2Q9H9E1 313 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 DYNLRB1Q9NP97 96 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 SLC35C2Q9NQQ7 365 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 DDX18Q9NVP1 670 aaKnown RBP4.22□□□□□ -1.73
SDCBP-207ENST00000520168 FKBP14Q9NWM8 211 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 PARPBPQ9NWS1 579 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 FLRT3Q9NZU0 649 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 KLHL14Q9P2G3 628 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 EXTL2Q9UBQ6 330 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 UPB1Q9UBR1 384 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 REV1Q9UBZ9 1251 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 TESQ9UGI8 421 aaKnown RBP4.22□□□□□ -1.73
SDCBP-207ENST00000520168 SLC12A4Q9UP95 1085 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 CHMP2BQ9UQN3 213 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 LRCH1Q9Y2L9 728 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 RNF11Q9Y3C5 154 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 PPIAL4AQ9Y536 164 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 TENM3Q9P273 2699 aa4.22□□□□□ -1.73
SDCBP-207ENST00000520168 IGHV3-15A0A0B4J1V0 119 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 A0A1W2PPM1 405 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 A0A1W2PR80 420 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 DNAJC9-AS1A6NH13 148 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 MYO1GB0I1T2 1018 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 H3BNH8 94 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 L7N2F9 121 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 ETV2O00321 342 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 COPEO14579 308 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 KLF11O14901 512 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 PIP5K1BO14986 540 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 LSM1O15116 133 aaKnown RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 SPAG7O75391 227 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 BANF1O75531 89 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 FSHBP01225 129 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 TROVE2P10155 538 aaKnown RBP eCLIP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 NPR2P20594 1047 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 FKBP2P26885 142 aaKnown RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 MAPK3P27361 379 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 SHC1P29353 583 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 MPGP29372 298 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 NTSP30990 170 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 CRHR1P34998 444 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 P2RX1P51575 399 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 SLC16A1P53985 500 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 ZP4Q12836 540 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 SNCBQ16143 134 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 FAM83EQ2M2I3 478 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 SPIN4Q56A73 249 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 SLC25A53Q5H9E4 307 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 ZNF311Q5JNZ3 666 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 SPDYAQ5MJ70 313 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 GRTP1Q5TC63 336 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 THOC7Q6I9Y2 204 aaKnown RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 TMEM107Q6UX40 140 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 TRPM8Q7Z2W7 1104 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 GOLGA7Q7Z5G4 137 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 MTDHQ86UE4 582 aaKnown RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 CTAGE3PQ8IX95 158 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 CDRT4Q8N9R6 151 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 WDR31Q8NA23 367 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 ZBTB8BQ8NAP8 495 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 IL17RDQ8NFM7 739 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 CEP70Q8NHQ1 597 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 RFWD2Q8NHY2 731 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 FAM81AQ8TBF8 368 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 MZB1Q8WU39 189 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 RDH5Q92781 318 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 HOXB13Q92826 284 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 DVL3Q92997 716 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 POP5Q969H6 163 aaKnown RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 EXOSC8Q96B26 276 aaKnown RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 PPP1R14BQ96C90 147 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 LRRC58Q96CX6 371 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 SH3YL1Q96HL8 342 aaPredicted RBP4.21□□□□□ -1.74
SDCBP-207ENST00000520168 DOK1Q99704 481 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 RBBP8Q99708 897 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 NPAS1Q99742 590 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 COQ7Q99807 217 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 CPNE1Q99829 537 aa4.21□□□□□ -1.74
SDCBP-207ENST00000520168 CITED1Q99966 193 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms