RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 LGALS3BPQ08380 585 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 NPRL3Q12980 569 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 SQLEQ14534 574 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 PDCD4Q53EL6 469 aaKnown RBP13.82□□□□□ -0.2
VPS37A-204ENST00000519381 LIPNQ5VXI9 398 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 LSRQ86X29 649 aaPredicted RBP13.82□□□□□ -0.2
VPS37A-204ENST00000519381 MFSD8Q8NHS3 518 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 RNF217Q8TC41 542 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 MGARPQ8TDB4 240 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 ANKRD27Q96NW4 1050 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 FOXN4Q96NZ1 517 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 SPATA9Q9BWV2 254 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 TPT1P8Q9HAU6 139 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 THAP1Q9NVV9 213 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 SELENONQ9NZV5 590 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 PCDHB14Q9Y5E9 798 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 GPR45Q9Y5Y3 372 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 DSPPQ9NZW4 1301 aa13.82□□□□□ -0.2
VPS37A-204ENST00000519381 ARFGEF3Q5TH69 2177 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 hCG_2039718K7EN88 272 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 NR5A2O00482 541 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 AIM2O14862 343 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 UPK3AO75631 287 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 PNMTP11086 282 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 HOXB1P14653 301 aaPredicted RBP13.81□□□□□ -0.2
VPS37A-204ENST00000519381 ZNF23P17027 643 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 ACAA2P42765 397 aaKnown RBP13.81□□□□□ -0.2
VPS37A-204ENST00000519381 IDH3GP51553 393 aaPredicted RBP13.81□□□□□ -0.2
VPS37A-204ENST00000519381 ADIPOQQ15848 244 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 KRTAP24-1Q3LI83 254 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 C3orf36Q3SXR2 165 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 MSANTD1Q6ZTZ1 278 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 SERPINA11Q86U17 422 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 MAGEE2Q8TD90 523 aaPredicted RBP13.81□□□□□ -0.2
VPS37A-204ENST00000519381 SLC38A5Q8WUX1 472 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 BCL2L2Q92843 193 aaPredicted RBP13.81□□□□□ -0.2
VPS37A-204ENST00000519381 MSI2Q96DH6 328 aaKnown RBP13.81□□□□□ -0.2
VPS37A-204ENST00000519381 BOD1Q96IK1 185 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 C19orf24Q9BVV8 132 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 LINC00470Q9BZP3 86 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 BPESC1Q9GZL8 116 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 RCE1Q9Y256 329 aa13.81□□□□□ -0.2
VPS37A-204ENST00000519381 YLPM1P49750 1951 aaKnown RBP13.8□□□□□ -0.2
VPS37A-204ENST00000519381 IGHV4-61A0A0C4DH41 118 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 VWC2LB2RUY7 222 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 OR2T1O43869 369 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 PRG2P13727 222 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 NPR2P20594 1047 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 THBS2P35442 1172 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 SRP14P37108 136 aaKnown RBP13.8□□□□□ -0.2
VPS37A-204ENST00000519381 CHN2P52757 468 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 STX1BP61266 288 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 EFNB3Q15768 340 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 MST1LQ2TV78 715 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 C5orf46Q6UWT4 87 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 SPATA21Q7Z572 469 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 EPHX4Q8IUS5 362 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 KDM8Q8N371 416 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 CLIP4Q8N3C7 705 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 PIK3C3Q8NEB9 887 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 NUP37Q8NFH4 326 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 BBS10Q8TAM1 723 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 NEU4Q8WWR8 484 aaPredicted RBP13.8□□□□□ -0.2
VPS37A-204ENST00000519381 SLC38A4Q969I6 547 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 ZBTB9Q96C00 473 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 PRR14Q9BWN1 585 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 PLK3Q9H4B4 646 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 B3GAT2Q9NPZ5 323 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 NKIRAS1Q9NYS0 192 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 ZIM2Q9NZV7 527 aa13.8□□□□□ -0.2
VPS37A-204ENST00000519381 SH3PXD2BA1X283 911 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 SLC35F4A4IF30 521 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 TMEM229AB2RXF0 380 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 UBDO15205 165 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 ZCCHC18P0CG32 403 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 DAOP14920 347 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 NQO1P15559 274 aaKnown RBP13.79□□□□□ -0.2
VPS37A-204ENST00000519381 APEX1P27695 318 aaKnown RBP13.79□□□□□ -0.2
VPS37A-204ENST00000519381 ARR3P36575 388 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 P2RY4P51582 365 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 ARF1P84077 181 aaKnown RBP13.79□□□□□ -0.2
VPS37A-204ENST00000519381 MIER2Q8N344 545 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 SVOPLQ8N434 492 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 OXGR1Q96P68 337 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 ZNF442Q9H7R0 627 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 CRNNQ9UBG3 495 aaPredicted RBP13.79□□□□□ -0.2
VPS37A-204ENST00000519381 SLC13A4Q9UKG4 626 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 USP22Q9UPT9 525 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 NOX1Q9Y5S8 564 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 MALRD1Q5VYJ5 2156 aa13.79□□□□□ -0.2
VPS37A-204ENST00000519381 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.79□□□□□ -0.23e-13■■□□□ 13.9
VPS37A-204ENST00000519381 CBR1P16152 277 aa13.78□□□□□ -0.2
VPS37A-204ENST00000519381 CALCRP30988 508 aa13.78□□□□□ -0.2
VPS37A-204ENST00000519381 THBS4P35443 961 aa13.78□□□□□ -0.2
VPS37A-204ENST00000519381 POLR2JP52435 117 aaKnown RBP13.78□□□□□ -0.2
VPS37A-204ENST00000519381 HOXC5Q00444 222 aa13.78□□□□□ -0.2
VPS37A-204ENST00000519381 SNTB2Q13425 540 aaKnown RBP13.78□□□□□ -0.2
VPS37A-204ENST00000519381 DAG1Q14118 895 aa13.78□□□□□ -0.2
VPS37A-204ENST00000519381 CR1LQ2VPA4 569 aa13.78□□□□□ -0.2
VPS37A-204ENST00000519381 CEACAM16Q2WEN9 425 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms