RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	CCDC74B	Q96LY2	380 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	TSPAN32	Q96QS1	320 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	ALG12	Q9BV10	488 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	TTTY10	Q9BZA0	68 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	PPP1R3E	Q9H7J1	279 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	RPRD1B	Q9NQG5	326 aa	Known RBP	11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	NCDN	Q9UBB6	729 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	MOK	Q9UQ07	419 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	KHNYN	O15037	678 aa	Known RBP	11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	YKT6	O15498	198 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	SCO2	O43819	266 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	GMFG	O60234	142 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	TMCC2	O75069	709 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	GP1BB	P13224	206 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	PTBP1	P26599	531 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	RFX2	P48378	723 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	GBX2	P52951	348 aa	Predicted RBP	11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	RIN1	Q13671	783 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	QPRT	Q15274	297 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	CCDC58	Q4VC31	144 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	ACSM3	Q53FZ2	586 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	MEST	Q5EB52	335 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	ZNF684	Q5T5D7	378 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	HBM	Q6B0K9	141 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	MZT2A	Q6P582	158 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	CNIH2	Q6PI25	160 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	LYPD4	Q6UWN0	246 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	OVCH1	Q7RTY7	1134 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	NRARP	Q7Z6K4	114 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	NUBPL	Q8TB37	319 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	SNX33	Q8WV41	574 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	TXNDC15	Q96J42	360 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	WDR77	Q9BQA1	342 aa	Predicted RBP	11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	PTDSS2	Q9BVG9	487 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	GAREM1	Q9H706	876 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	SYNDIG1	Q9H7V2	258 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	TAS2R5	Q9NYW4	299 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	NPFFR2	Q9Y5X5	522 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362	MPDZ	O75970	2070 aa		11.23	□□□□□ -0.61
SPIDR-210	ENST00000519362		A0A0G2JK05	382 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	ZNF354A	O60765	605 aa	Predicted RBP	11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	NUDT14	O95848	222 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	MT-ATP6	P00846	226 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	HIST1H2AB	P04908	130 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	THBS2	P35442	1172 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	GDI2	P50395	445 aa	Known RBP	11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	POLR2H	P52434	150 aa	Known RBP	11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	SLC26A5	P58743	744 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	RPS11	P62280	158 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	SCN1B	Q07699	218 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	C1QL3	Q5VWW1	255 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	GPR139	Q6DWJ6	353 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	RPL22L1	Q6P5R6	122 aa	Known RBP	11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	HIST3H2A	Q7L7L0	130 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	GRINA	Q7Z429	371 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	ADGRG3	Q86Y34	549 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	MISP	Q8IVT2	679 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	EID2	Q8N6I1	236 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	RPS4Y2	Q8TD47	263 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	DUSP19	Q8WTR2	217 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	HIST1H2AC	Q93077	130 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	KCTD12	Q96CX2	325 aa	Known RBP	11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	TSSK2	Q96PF2	358 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	UBL7	Q96S82	380 aa	Predicted RBP	11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	NDEL1	Q9GZM8	345 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	CCDC86	Q9H6F5	360 aa	Known RBP	11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	MARCH7	Q9H992	704 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	GRHPR	Q9UBQ7	328 aa		11.22	□□□□□ -0.61
SPIDR-210	ENST00000519362	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362		A0A1W2PRG6	482 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	TMEM72	A0PK05	275 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	TMEM200C	A6NKL6	621 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	FAM171A2	A8MVW0	826 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	DCTN6	O00399	190 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	DLL1	O00548	723 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	SNPH	O15079	494 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	SUSD5	O60279	629 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	SLC19A2	O60779	497 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	CPNE3	O75131	537 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	SERPINI2	O75830	405 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	SERPINA3	P01011	423 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	HLA-DQB1	P01920	261 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	MYL9	P24844	172 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	ASAH1	Q13510	395 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	EFR3A	Q14156	821 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	PYDC2	Q56P42	97 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	POMZP3	Q6PJE2	187 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	PAMR1	Q6UXH9	720 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	SLC16A9	Q7RTY1	509 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	TIGD4	Q8IY51	512 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	IL17RD	Q8NFM7	739 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	OR13C5	Q8NGS8	318 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	CHAC2	Q8WUX2	184 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	RNF138	Q8WVD3	245 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	THAP4	Q8WY91	577 aa		11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	RNF166	Q96A37	237 aa	Predicted RBP	11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	MRPL48	Q96GC5	212 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-210	ENST00000519362	SPSB2	Q99619	263 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms