RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	RPS4X	P62701	263 aa	Known RBP	21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	FOXD4	Q12950	439 aa	Predicted RBP	21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	RABL3	Q5HYI8	236 aa		21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	C10orf53	Q8N6V4	93 aa		21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	ZNF417	Q8TAU3	575 aa		21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	ZNF317	Q96PQ6	595 aa	Predicted RBP	21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	ZNF587	Q96SQ5	575 aa	Predicted RBP	21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	RSPO3	Q9BXY4	272 aa	Predicted RBP	21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	GSX2	Q9BZM3	304 aa		21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	OBP2B	Q9NPH6	170 aa		21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	SLC25A15	Q9Y619	301 aa		21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	FREM1	Q5H8C1	2179 aa		21.26	■□□□□ 0.99
CNOT7-204	ENST00000518885	IGKV1D-42	A0A075B6H8	117 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	DPRX	A6NFQ7	191 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	SLC43A1	O75387	559 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	MT-ATP6	P00846	226 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	ENTPD8	Q5MY95	495 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885		Q5PR19	223 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	C9orf135	Q5VTT2	229 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	SEZ6L2	Q6UXD5	910 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	CALHM3	Q86XJ0	350 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	EPHX4	Q8IUS5	362 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	ANKK1	Q8NFD2	765 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	OR6T1	Q8NGN1	323 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	C10orf82	Q8WW14	230 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	TAMM41	Q96BW9	452 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	PERP	Q96FX8	193 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	MPP4	Q96JB8	637 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	PRR14	Q9BWN1	585 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	LINC00470	Q9BZP3	86 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	NSRP1	Q9H0G5	558 aa	Known RBP	21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	SLC17A5	Q9NRA2	495 aa		21.25	■□□□□ 0.99
CNOT7-204	ENST00000518885	TRAPPC13	A5PLN9	417 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	FXYD1	O00168	92 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	ABCD4	O14678	606 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	PAX1	P15863	534 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	SELENOP	P49908	381 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	GZMM	P51124	257 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	CLDN17	P56750	224 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	HMBOX1	Q6NT76	420 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	TTC33	Q6PID6	262 aa	Predicted RBP	21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	UEVLD	Q8IX04	471 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	PIK3C3	Q8NEB9	887 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	GPR32P1	Q8NGA4	272 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	VANGL1	Q8TAA9	524 aa	Predicted RBP	21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	SMAP2	Q8WU79	429 aa	Predicted RBP	21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	TRMT61A	Q96FX7	289 aa	Known RBP	21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	BOD1	Q96IK1	185 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	POLR2J2	Q9GZM3	115 aa	Known RBP	21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	POLR2J3	Q9H1A7	115 aa	Known RBP	21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	ALG2	Q9H553	416 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	POU2F3	Q9UKI9	436 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	NOX1	Q9Y5S8	564 aa		21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	PRRC2A	P48634	2157 aa	Known RBP	21.24	■□□□□ 0.99
CNOT7-204	ENST00000518885	CPSF4L	A6NMK7	179 aa	Known RBP	21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	FAM220BP	B1ANY3	271 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	NDUFAB1	O14561	156 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	PTH2R	P49190	550 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	ZNF83	P51522	516 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	CDH11	P55287	796 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	PMS2P3	Q13401	168 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	SLC22A25	Q6T423	547 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	PIAS4	Q8N2W9	510 aa	Predicted RBP	21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	GPR137C	Q8N3F9	429 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	WFDC11	Q8NEX6	87 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	OR2T12	Q8NG77	320 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	ADAMTS16	Q8TE57	1224 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	GTPBP3	Q969Y2	492 aa	Known RBP	21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	SLC19A3	Q9BZV2	496 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	PCDHAC1	Q9H158	963 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	FKRP	Q9H9S5	495 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	MRPL39	Q9NYK5	338 aa	Known RBP	21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	CISD1	Q9NZ45	108 aa	Known RBP	21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	ARMCX1	Q9P291	453 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885	LAMP3	Q9UQV4	416 aa		21.23	■□□□□ 0.99
CNOT7-204	ENST00000518885		M0R1B8	84 aa		21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	TPST2	O60704	377 aa		21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	OR6A2	O95222	327 aa		21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	CDH2	P19022	906 aa	Predicted RBP	21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	RIPPLY3	P57055	190 aa		21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	UBE2N	P61088	152 aa	Known RBP	21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	KDM8	Q8N371	416 aa		21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	KBTBD8	Q8NFY9	601 aa		21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	RCN3	Q96D15	328 aa		21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	SLC41A3	Q96GZ6	507 aa		21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	HOPX	Q9BPY8	73 aa	Predicted RBP	21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	B3GAT2	Q9NPZ5	323 aa		21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	NPAP1	Q9NZP6	1156 aa		21.22	■□□□□ 0.99
CNOT7-204	ENST00000518885	RAI1	Q7Z5J4	1906 aa	Predicted RBP	21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	BGLAP	P02818	100 aa		21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	HOXB1	P14653	301 aa	Predicted RBP	21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	CBL	P22681	906 aa		21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	CD40	P25942	277 aa		21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	IFNA8	P32881	189 aa		21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	PUDP	Q08623	228 aa		21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	LINC00114	Q6XXX2	140 aa		21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	SPATA21	Q7Z572	469 aa		21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	YTHDF3	Q7Z739	585 aa	Known RBP	21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	LILRB1	Q8NHL6	650 aa	Predicted RBP	21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	LZIC	Q8WZA0	190 aa		21.21	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms