RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PRAMEF8Q5VWM4 474 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 PRAMEF7Q5VXH5 474 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 MFSD14CQ5VZR4 134 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 GGNBP1Q5YKI7 109 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF626Q68DY1 528 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 NADSYN1Q6IA69 706 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 NAPEPLDQ6IQ20 393 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ADAM5Q6NVV9 412 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 FBXW12Q6X9E4 464 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC39A5Q6ZMH5 540 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 COLCA1Q6ZS62 124 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ACOT7LQ6ZUV0 252 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ASB18Q6ZVZ8 466 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 DPPA4Q7L190 304 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CXXC5Q7LFL8 322 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 PKD1L3Q7Z443 1732 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 FAM220AQ7Z4H9 259 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 C6orf120Q7Z4R8 191 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 GRASPQ7Z6J2 395 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TMPRSS11BQ86T26 416 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TMEM135Q86UB9 458 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF546Q86UE3 836 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 THOC6Q86W42 341 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CCDC117Q8IWD4 279 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 MMP21Q8N119 569 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CISD2Q8N5K1 135 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 LRRC52Q8N7C0 313 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 INO80EQ8NBZ0 244 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TMEM161BQ8NDZ6 487 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 B3GNT7Q8NFL0 401 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 DBF4BQ8NFT6 615 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR13C2Q8NGS9 318 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF671Q8TAW3 534 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 LKAAEAR1Q8TD35 194 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 WFIKKN2Q8TEU8 576 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CCDC107Q8WV48 283 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 APH1BQ8WW43 257 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 PIWIL1Q96J94 861 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 FOXN4Q96NZ1 517 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TECTBQ96PL2 329 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR5B2Q96R09 309 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CNN2Q99439 309 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 RNF2Q99496 336 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SUCNR1Q9BXA5 334 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SNHG12Q9BXW3 62 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR8D2Q9GZM6 311 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 RAB6CQ9H0N0 254 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 FXYD6Q9H0Q3 95 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 HIPK2Q9H2X6 1198 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 RNF167Q9H6Y7 350 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 HHATLQ9HCP6 504 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC52A3Q9NQ40 469 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TREX1Q9NSU2 369 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC35D1Q9NTN3 355 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TMEM100Q9NV29 134 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 MRPL22Q9NWU5 206 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ASB6Q9NWX5 421 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 MS4A12Q9NXJ0 267 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 PLEK2Q9NYT0 353 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 UPB1Q9UBR1 384 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR14J1Q9UGF5 321 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 IL17BQ9UHF5 180 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ST6GALNAC2Q9UJ37 374 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 EXO1Q9UQ84 846 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CAMK2AQ9UQM7 478 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ANGPT4Q9Y264 503 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 EXOSC1Q9Y3B2 195 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 NME7Q9Y5B8 376 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TIMM10BQ9Y5J6 103 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 UBIAD1Q9Y5Z9 338 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SPACA6W5XKT8 324 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 PAPPAQ13219 1627 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 MTCL1Q9Y4B5 1905 aaKnown RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 TNS3Q68CZ2 1445 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ABHD14A-ACY1A0A1B0GW23 586 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ARRDC5A6NEK1 342 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF724A8MTY0 619 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 SERPINE3A8MV23 424 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ALG1L2C9J202 215 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 C9J4A7 227 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 TLR4O00206 839 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 TNFRSF11BO00300 401 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 FOXE1O00358 373 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 MEIS2O14770 477 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 WNT9AO14904 365 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 FLRT2O43155 660 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 B4GALT3O60512 393 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 EIF4E2O60573 245 aaKnown RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 WDR1O75083 606 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR2J2O76002 312 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 TNFSF15O95150 251 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 RAB36O95755 333 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 TRUB2O95900 331 aaKnown RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 TBX18O95935 607 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 CYB5R3P00387 301 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 TK1P04183 234 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 AMY2AP04746 511 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 F7P08709 466 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 NPSP0C0P6 89 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms