RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 TRIM23P36406 574 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 DLX1P56177 255 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 IRF8Q02556 426 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 CCDC173Q0VFZ6 552 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 GK3PQ14409 553 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 TMEM249Q2WGJ8 235 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 KLK9Q2XQG4 91 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 TCHHL1Q5QJ38 904 aaPredicted RBP-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 TIMM23BQ5SRD1 257 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 STEAP1BQ6NZ63 245 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 ZNF773Q6PK81 442 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 SLC16A13Q7RTY0 426 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 GPR141Q7Z602 305 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 ITIH5Q86UX2 942 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 SERPINA9Q86WD7 417 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 C17orf64Q86WR6 236 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 ZNF595Q8IYB9 648 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 TEX11Q8IYF3 940 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 C1orf158Q8N1D5 194 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 DYNAPQ8N1N2 210 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 MRPL43Q8N983 215 aaKnown RBP-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 APOPT1Q96IL0 206 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 PGLYRP4Q96LB8 373 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 OR8B2Q96RD0 313 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 NR1H4Q96RI1 486 aaPredicted RBP-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 INPP5KQ9BT40 448 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 NFKBIZQ9BYH8 718 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 KLHL4Q9C0H6 718 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 DEFB127Q9H1M4 99 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 RRN3Q9NYV6 651 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 PIPOXQ9P0Z9 390 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 LHX3Q9UBR4 397 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 HMGXB4Q9UGU5 601 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 JMJD1CQ15652 2540 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 SHROOM4Q9ULL8 1493 aa-2.2□□□□□ -2.76
SNORA40.16-201ENST00000517238 MYO7AQ13402 2215 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 YLPM1P49750 1951 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 GLYATL1P3A0A0U1RQE8 302 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 FAM237BA0A1B0GVD1 139 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 A6NIZ1 184 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 LRRC72A6NJI9 287 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 TMEM150CB9EJG8 249 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 CCER2I3L3R5 266 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 AGPAT2O15120 278 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 COCHO43405 550 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 ACSL4O60488 711 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 OPN1SWP03999 348 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 HLA-DPB1P04440 258 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 VIMP08670 466 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 IFIT1P09914 478 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 UBTFL6P0CB48 400 aaPredicted RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 CSH1P0DML2 217 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 CSH2P0DML3 217 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 RNASE3P12724 160 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 EZRP15311 586 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 ATP6V1B2P21281 511 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 BCKDHBP21953 392 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 DTYMKP23919 212 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 GCAP28676 217 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 CD80P33681 288 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 PAFAH1B1P43034 410 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 NPY4RP50391 375 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 TUBP50607 506 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 RAB27AP51159 221 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 RAP1BP61224 184 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 RPL7AP62424 266 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 RPP38P78345 283 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 MC1RQ01726 317 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 CXCL9Q07325 125 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 ZRSR2Q15696 482 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 GPR68Q15743 365 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 SNAPC1Q16533 368 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 ZSCAN26Q16670 478 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 NDUFA9Q16795 377 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 RNASE13Q5GAN3 156 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 BEND6Q5SZJ8 279 aaPredicted RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 GKAP1Q5VSY0 366 aaPredicted RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 LINC00346Q8IVM7 164 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 AMN1Q8IY45 258 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 OR2L13Q8N349 312 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 SYT2Q8N9I0 419 aaPredicted RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 SPACA4Q8TDM5 124 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 SEPT8Q92599 483 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 EXT2Q93063 718 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 P2RX5Q93086 422 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 NXNL1Q96CM4 212 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 MED8Q96G25 268 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 GPR82Q96P67 336 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 HIST1H4GQ99525 98 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 SNX25Q9H3E2 840 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 PALMDQ9NP74 551 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 PLEK2Q9NYT0 353 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 TUBGCP4Q9UGJ1 667 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 PURGQ9UJV8 347 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 RUVBL2Q9Y230 463 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 STK38LQ9Y2H1 464 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 PRKAB1Q9Y478 270 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 OR1A2Q9Y585 309 aa-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 F11RQ9Y624 299 aaKnown RBP-2.21□□□□□ -2.76
SNORA40.16-201ENST00000517238 MUC4Q99102 2169 aa-2.22□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms