RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 BTN1A1Q13410 526 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 IKZF1Q13422 519 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR2F1Q13607 317 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 HTR4Q13639 388 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ALKBH1Q13686 389 aaKnown RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 EXOSC2Q13868 293 aaKnown RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 CBFBQ13951 182 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 FAM53BQ14153 422 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 CDK5R1Q15078 307 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 PEA15Q15121 130 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 P2RY14Q15391 338 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 CEBPEQ15744 281 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TOMM34Q15785 309 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 RAB11BQ15907 218 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF77Q15935 545 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF79Q15937 498 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZXDCQ2QGD7 858 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF791Q3KP31 576 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 C2orf76Q3KRA6 126 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 LGALSLQ3ZCW2 172 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 CDNFQ49AH0 187 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 CDONQ4KMG0 1287 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 DEFB134Q4QY38 66 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TP53I3Q53FA7 332 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TRMT12Q53H54 448 aaKnown RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 SOWAHCQ53LP3 525 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ACTBL2Q562R1 376 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ALG10Q5BKT4 473 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 EOGTQ5NDL2 527 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 MRPL2Q5T653 305 aaKnown RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 HES5Q5TA89 166 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ARHGAP40Q5TG30 622 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 PRAMEF9Q5VWM5 478 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 PLPP4Q5VZY2 271 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 C18orf63Q68DL7 685 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF626Q68DY1 528 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 FCRLBQ6BAA4 426 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 DMKNQ6E0U4 476 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 AWAT2Q6E213 333 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 LAIR1Q6GTX8 287 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 MRM1Q6IN84 353 aaKnown RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 SLC18B1Q6NT16 456 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 MFSD12Q6NUT3 480 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 STEAP1BQ6NZ63 245 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 FAHD2BQ6P2I3 314 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 FBXO42Q6P3S6 717 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 NIPAL3Q6P499 406 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 LEG1Q6P5S2 330 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM65Q6PI78 240 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 HAGHLQ6PII5 290 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 LRFN4Q6PJG9 635 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 DEGS2Q6QHC5 323 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TSSK4Q6SA08 328 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 PAQR6Q6TCH4 344 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 STAC2Q6ZMT1 411 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF836Q6ZNA1 936 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF620Q6ZNG0 422 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM91Q6ZNR0 172 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 RFLNAQ6ZTI6 216 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ACOT7LQ6ZUV0 252 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMUB2Q71RG4 321 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 PARS2Q7L3T8 475 aaKnown RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF627Q7L945 461 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 NLRC3Q7RTR2 1065 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 SLC29A4Q7RTT9 530 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 KANSL1Q7Z3B3 1105 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 HSD17B13Q7Z5P4 300 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 BCDIN3DQ7Z5W3 292 aaKnown RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TSEN54Q7Z6J9 526 aaKnown RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM150AQ86TG1 271 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMPRSS12Q86WS5 348 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 GKN2Q86XP6 184 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 CACUL1Q86Y37 369 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF584Q8IVC4 421 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 MISPQ8IVT2 679 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 SERPINA12Q8IW75 414 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 DND1Q8IYX4 353 aaKnown RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 CMTM4Q8IZR5 234 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 BEST3Q8N1M1 668 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 CRIPAKQ8N1N5 446 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 KDM8Q8N371 416 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 GTPBP8Q8N3Z3 284 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 C9orf62Q8N4C0 152 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 EIF4E3Q8N5X7 224 aaKnown RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ARIH2OSQ8N7S6 290 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZFP41Q8N8Y5 198 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 Q8N9G6 341 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ANKRD53Q8N9V6 530 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 PNLDC1Q8NA58 520 aaKnown RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 DTWD2Q8NBA8 298 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM229BQ8NBD8 167 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 SLC16A11Q8NCK7 471 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 NAXEQ8NCW5 288 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 CCDC54Q8NEL0 328 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 DNAAF1Q8NEP3 725 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 BEST4Q8NFU0 473 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 NLGN4YQ8NFZ3 816 aaPredicted RBP1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 VN1R2Q8NFZ6 395 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 GPR32P1Q8NGA4 272 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms