RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SLC52A3Q9NQ40 469 aa11.97□□□□□ -0.49
TCOF1-215ENST00000515516 TESQ9UGI8 421 aaKnown RBP11.97□□□□□ -0.49
TCOF1-215ENST00000515516 GDF2Q9UK05 429 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-215ENST00000515516 DSCAMO60469 2012 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 FTCDNL1E5RQL4 147 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 NQO1P15559 274 aaKnown RBP11.96□□□□□ -0.49
TCOF1-215ENST00000515516 SH3BGRP55822 239 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-215ENST00000515516 DSCR9P59020 149 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 EGR4Q05215 589 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 RUNDC3AQ59EK9 446 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 H1FNTQ75WM6 255 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-215ENST00000515516 DHDDSQ86SQ9 333 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 GPR137CQ8N3F9 429 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 C10orf53Q8N6V4 93 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 C11orf65Q8NCR3 313 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 OR1K1Q8NGR3 316 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 TAAR8Q969N4 342 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 ZNF317Q96PQ6 595 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-215ENST00000515516 ALKBH3Q96Q83 286 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-215ENST00000515516 CPPED1Q9BRF8 314 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-215ENST00000515516 PTDSS2Q9BVG9 487 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 ASPNQ9BXN1 380 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 LINC00470Q9BZP3 86 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 NPHS2Q9NP85 383 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 RCE1Q9Y256 329 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 PMF1-BGLAPU3KQ54 211 aa11.96□□□□□ -0.49
TCOF1-215ENST00000515516 RAI1Q7Z5J4 1906 aaPredicted RBP11.96□□□□□ -0.5
TCOF1-215ENST00000515516 TRBV5-3A0A0A0MS03 114 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 A0A0G2JND7 137 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 INAFM1C9JVW0 142 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 M0R082 166 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 TPST1O60507 370 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 NDUFS7O75251 213 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 UPK3AO75631 287 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 VIMP08670 466 aaKnown RBP11.95□□□□□ -0.5
TCOF1-215ENST00000515516 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-215ENST00000515516 CBLP22681 906 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 HTR2AP28223 471 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 GRPRP30550 384 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 APOBEC3AP31941 199 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-215ENST00000515516 SLC25A3Q00325 362 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 ROR2Q01974 943 aaKnown RBP11.95□□□□□ -0.5
TCOF1-215ENST00000515516 LGALS3BPQ08380 585 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 DMTNQ08495 405 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 RBBP4Q09028 425 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 NFYCQ13952 458 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 OR1Q1Q15612 314 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 TBRG1Q3YBR2 411 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 GLIPR1L2Q4G1C9 344 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 ANKRD16Q6P6B7 361 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 CLEC2AQ6UVW9 174 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 DLEU7Q6UYE1 221 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 SLC30A8Q8IWU4 369 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 UEVLDQ8IX04 471 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 C10orf111Q8N326 155 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 MAPK1IP1LQ8NDC0 245 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 PIK3C3Q8NEB9 887 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 ZNF417Q8TAU3 575 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 TSPEARQ8WU66 669 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 BOD1Q96IK1 185 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 SLC38A2Q96QD8 506 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 ZNF587Q96SQ5 575 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-215ENST00000515516 PRR14Q9BWN1 585 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 IKZF5Q9H5V7 419 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 MOKQ9UQ07 419 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 CORINQ9Y5Q5 1042 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 ARID1AO14497 2285 aa11.95□□□□□ -0.5
TCOF1-215ENST00000515516 ROS1P08922 2347 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 A0A087WUJ7 227 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 A0A096LPE4 126 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 A0A1W2PPZ6 126 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 CRYAAP02489 173 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 ADRM1Q16186 407 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 METTL21CQ5VZV1 264 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 C11orf71Q6IPW1 123 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 B3GLCTQ6Y288 498 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 DPP10Q8N608 796 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 SMYD1Q8NB12 490 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 ANKK1Q8NFD2 765 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 OR6S1Q8NH40 331 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 MAGEE2Q8TD90 523 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-215ENST00000515516 SLC26A7Q8TE54 656 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 BCL2L2Q92843 193 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-215ENST00000515516 ANKRD27Q96NW4 1050 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 CGREF1Q99674 301 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 KLHL14Q9P2G3 628 aa11.94□□□□□ -0.5
TCOF1-215ENST00000515516 ARPC4-TTLL3A0A0A6YYG9 625 aa11.93□□□□□ -0.5
TCOF1-215ENST00000515516 A0A0B4J2E0 115 aa11.93□□□□□ -0.5
TCOF1-215ENST00000515516 IGHV1-18A0A0C4DH31 117 aa11.93□□□□□ -0.5
TCOF1-215ENST00000515516 LOC102725191A0A1B0GVB3 256 aa11.93□□□□□ -0.5
TCOF1-215ENST00000515516 A0A1B0GX12 115 aa11.93□□□□□ -0.5
TCOF1-215ENST00000515516 VSTM5A8MXK1 200 aa11.93□□□□□ -0.5
TCOF1-215ENST00000515516 ATP6V1G2-DDX39BF2Z307 99 aa11.93□□□□□ -0.5
TCOF1-215ENST00000515516 M0QX08 132 aa11.93□□□□□ -0.5
TCOF1-215ENST00000515516 EDF1O60869 148 aaKnown RBP11.93□□□□□ -0.5
TCOF1-215ENST00000515516 MFN2O95140 757 aa11.93□□□□□ -0.5
TCOF1-215ENST00000515516 MTPNP58546 118 aa11.93□□□□□ -0.5
TCOF1-215ENST00000515516 PMS2P3Q13401 168 aa11.93□□□□□ -0.5
TCOF1-215ENST00000515516 SWT1Q5T5J6 900 aaKnown RBP11.93□□□□□ -0.5
TCOF1-215ENST00000515516 INTS11Q5TA45 600 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms