RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 C14orf79Q96F83 325 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 CLPTM1LQ96KA5 538 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 HS6ST2Q96MM7 605 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 DACH2Q96NX9 599 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 THTPAQ9BU02 230 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 PRPF19Q9UMS4 504 aaKnown RBP12.35□□□□□ -0.43
USP46-209ENST00000514536 ENPP4Q9Y6X5 453 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 hCG_2039718K7EN88 272 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 GYG2O15488 501 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 MT-ND1P03886 318 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 ZNF43P17038 809 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 SSTR2P30874 369 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 TLE4Q04727 773 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 TRIM25Q14258 630 aaKnown RBP12.34□□□□□ -0.43
USP46-209ENST00000514536 POU4F3Q15319 338 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 SFRP5Q5T4F7 317 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 FBXW9Q5XUX1 488 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 Q6ZT83 130 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 C22orf34Q6ZV56 151 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 CYP4Z1Q86W10 505 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 OFCC1Q8IZS5 231 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 SCAIQ8N9R8 606 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 OR5J2Q8NH18 312 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 TMEM45BQ96B21 275 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 SLC7A6OSQ96CW6 309 aaPredicted RBP12.34□□□□□ -0.43
USP46-209ENST00000514536 C7orf34Q96L11 122 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 NANSQ9NR45 359 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 C20orf141Q9NUB4 165 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 MRPL39Q9NYK5 338 aaKnown RBP12.34□□□□□ -0.43
USP46-209ENST00000514536 NDUFAF4Q9P032 175 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 ACTR3BQ9P1U1 418 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 B3GAT1Q9P2W7 334 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 GPR52Q9Y2T5 361 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 MED31Q9Y3C7 131 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 FAM32AQ9Y421 112 aaKnown RBP12.34□□□□□ -0.43
USP46-209ENST00000514536 MPDZO75970 2070 aa12.34□□□□□ -0.43
USP46-209ENST00000514536 LOC102725191A0A1B0GVB3 256 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 ENO4A6NNW6 628 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 PLPP3O14495 311 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 CASKO14936 926 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 PRSS23O95084 383 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 HPRP00739 348 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 HIST1H2ABP04908 130 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 UMPSP11172 480 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 HLA-DOBP13765 273 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 PSMB1P20618 241 aaKnown RBP12.33□□□□□ -0.44
USP46-209ENST00000514536 ATP6V1B2P21281 511 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 AHCYP23526 432 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 CLDN17P56750 224 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
USP46-209ENST00000514536 VLDLRP98155 873 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 MS4A2Q01362 244 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 BNIP1Q12981 228 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 ITGADQ13349 1161 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 TRAM2Q15035 370 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 P2RY6Q15077 328 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 HIST3H2AQ7L7L0 130 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 DHFR2Q86XF0 187 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 ADPRHL1Q8NDY3 354 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 HIST1H2ACQ93077 130 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 SGTBQ96EQ0 304 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 ZC3HAV1LQ96H79 300 aaKnown RBP12.33□□□□□ -0.44
USP46-209ENST00000514536 MED18Q9BUE0 208 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 HDHD5Q9BXW7 423 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 FKRPQ9H9S5 495 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 NMNAT1Q9HAN9 279 aaPredicted RBP12.33□□□□□ -0.44
USP46-209ENST00000514536 MAN2C1Q9NTJ4 1040 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 UPB1Q9UBR1 384 aa12.33□□□□□ -0.44
USP46-209ENST00000514536 MYO9AB2RTY4 2548 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 ADGRG4Q8IZF6 3080 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 PIP5K1CO60331 668 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 LYZL6O75951 148 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 DIRAS1O95057 198 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 OR6A2O95222 327 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 CNOT4O95628 575 aaKnown RBP12.32□□□□□ -0.44
USP46-209ENST00000514536 SEMG1P04279 462 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 ADORA3P0DMS8 318 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 RHCEP18577 417 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 FUT1P19526 365 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 IGHV1-2P23083 117 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 SELENOPP49908 381 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 PUDPQ08623 228 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 FAPQ12884 760 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 DAZAP2Q15038 168 aaPredicted RBP12.32□□□□□ -0.44
USP46-209ENST00000514536 TSPO2Q5TGU0 170 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 TBPL2Q6SJ96 375 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 SLC46A3Q7Z3Q1 461 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 UEVLDQ8IX04 471 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 STEAP2Q8NFT2 490 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 KISS1RQ969F8 398 aaPredicted RBP12.32□□□□□ -0.44
USP46-209ENST00000514536 BTBD10Q9BSF8 475 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 ACTR6Q9GZN1 396 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 MUC13Q9H3R2 512 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 SLC7A10Q9NS82 523 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 TAS2R5Q9NYW4 299 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 ZNF229Q9UJW7 825 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 TESMINQ9Y4I5 508 aa12.32□□□□□ -0.44
USP46-209ENST00000514536 C11orf98E9PRG8 122 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 OR7A10O76100 309 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms