RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 PLGP00747 810 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CYC1P08574 325 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 COX7A2P14406 83 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 STOMP27105 288 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 MTNR1AP48039 350 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 POU3F4P49335 361 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 UCP2P55851 309 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CHIT1Q13231 466 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF345Q14585 488 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 RTP5Q14D33 572 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CYP27C1Q4G0S4 372 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 TCTE1Q5JU00 501 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 SLC27A4Q6P1M0 643 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 LYPD4Q6UWN0 246 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CASP12Q6UXS9 341 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CDH26Q8IXH8 852 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 SLC34A3Q8N130 599 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 OR9A1PQ8NGU1 263 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 ENKURQ8TC29 256 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 RGP1Q92546 391 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 TPD52L3Q96J77 140 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 ADAD1Q96M93 576 aaKnown RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CAMK1GQ96NX5 476 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CITED4Q96RK1 184 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 TEAD3Q99594 435 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 NMNAT2Q9BZQ4 307 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 ALX4Q9H161 411 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 C20orf85Q9H1P6 137 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 WWOXQ9NZC7 414 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 OPN4Q9UHM6 478 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 GPR160Q9UJ42 338 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CAMK2AQ9UQM7 478 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 ERVK-19Q9WJR5 959 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 KCNK6Q9Y257 313 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 RPH3AQ9Y2J0 694 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 A0A1B0GWJ7 208 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 E9PI62 339 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 F8VVB4 439 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 F8VWA3 439 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 FMO6PO60774 539 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 PRAF2O60831 178 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CLN5O75503 358 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 C1orf105O95561 183 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CD79AP11912 226 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 SELLP14151 372 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 IDH2P48735 452 aaKnown RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 SRP9P49458 86 aaKnown RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 ZFP36L1Q07352 338 aaKnown RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 LASP1Q14847 261 aaKnown RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 SLC25A35Q3KQZ1 300 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 FHL5Q5TD97 284 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 BAIAP2L2Q6UXY1 529 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF813Q6ZN06 617 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 SIAH3Q8IW03 269 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 TCEANCQ8N8B7 351 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 SFXN5Q8TD22 340 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 GATAD2BQ8WXI9 593 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 SMPDL3AQ92484 453 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 MS4A7Q9GZW8 240 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 TCEAL2Q9H3H9 227 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 TAS2R5Q9NYW4 299 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 SEC14L3Q9UDX4 400 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 SERTAD3Q9UJW9 196 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CLCA2Q9UQC9 943 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 GPR55Q9Y2T6 319 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 TRBV6-7A0A0A0MS04 114 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 IGKV1-8A0A0C4DH67 115 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 PGPEP1LA6NFU8 196 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 ISM1B1AKI9 464 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 RRP8O43159 456 aaKnown RBP6.76□□□□□ -1.33
CLIP1-205ENST00000514271 GMDSO60547 372 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 VSIG10L2P0DP72 767 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 EPXP11678 715 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 ATF1P18846 271 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 SCAND1P57086 179 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 EEF1A1P68104 462 aaKnown RBP6.76□□□□□ -1.33
CLIP1-205ENST00000514271 RPP30P78346 268 aaKnown RBP6.76□□□□□ -1.33
CLIP1-205ENST00000514271 DUSP2Q05923 314 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF169Q14929 603 aaPredicted RBP6.76□□□□□ -1.33
CLIP1-205ENST00000514271 MANEAQ5SRI9 462 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 BICRALQ6AI39 1079 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 ASPHD2Q6ICH7 369 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 WDR88Q6ZMY6 472 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF574Q6ZN55 896 aaPredicted RBP6.76□□□□□ -1.33
CLIP1-205ENST00000514271 IQCF1Q8N6M8 205 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 DTX3Q8N9I9 347 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 CLRN3Q8NCR9 226 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 BBS1Q8NFJ9 593 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 OR52J3Q8NH60 311 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 SCARB1Q8WTV0 552 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 RFT1Q96AA3 541 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 TMEM19Q96HH6 336 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF681Q96N22 645 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 TREX2Q9BQ50 279 aaPredicted RBP6.76□□□□□ -1.33
CLIP1-205ENST00000514271 WDR13Q9H1Z4 485 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF768Q9H5H4 540 aaKnown RBP6.76□□□□□ -1.33
CLIP1-205ENST00000514271 RASL12Q9NYN1 266 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 SLC23A2Q9UGH3 650 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 TINAGQ9UJW2 476 aa6.76□□□□□ -1.33
CLIP1-205ENST00000514271 DOCK9Q9BZ29 2069 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms