RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 CD1EP15812 388 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 PSMA4P25789 261 aaKnown RBP5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 LOXP28300 417 aaPredicted RBP5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 CASP9P55211 416 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 SORDQ00796 357 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 ZNF117Q03924 483 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 FOXF1Q12946 379 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 ALKBH1Q13686 389 aaKnown RBP5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 LASP1Q14847 261 aaKnown RBP5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 TOMM34Q15785 309 aaPredicted RBP5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 PLPPR5Q32ZL2 321 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 RUNDC3AQ59EK9 446 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 CBLN3Q6UW01 205 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 RNF165Q6ZSG1 346 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 P4HA3Q7Z4N8 544 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 HMGN2P46Q86SG4 172 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 TGIF2LYQ8IUE0 185 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 CLECL1Q8IZS7 167 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 OR5D16Q8NGK9 328 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 FAM110BQ8TC76 370 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 ZBED6CLQ96FA7 236 aaPredicted RBP5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 ZC3HAV1LQ96H79 300 aaKnown RBP5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 ZNF764Q96H86 408 aaPredicted RBP5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 ADGRG7Q96K78 797 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 MARK4Q96L34 752 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 RNF145Q96MT1 663 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 FOXC2Q99958 501 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 SRXN1Q9BYN0 137 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 TBL1XR1Q9BZK7 514 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 RNF122Q9H9V4 155 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 MED17Q9NVC6 651 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 ATP6V1HQ9UI12 483 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 SNX8Q9Y5X2 465 aa5.66□□□□□ -1.5
HMGN1P17-201ENST00000513734 JMJD1CQ15652 2540 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 A0A0J9YW62 118 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 C9JVG2 144 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 EMC8O43402 210 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 CXCL13O43927 109 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 RAF1P04049 648 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 HMGN2P05204 90 aaKnown RBP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 BPGMP07738 259 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 FGF4P08620 206 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 ALOX5P09917 674 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 G6PDP11413 515 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 NEFHP12036 1026 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 CD99P14209 185 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 TBXA2RP21731 343 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 DNASE1P24855 282 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 EDNRAP25101 427 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 IDUAP35475 653 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 GCKP35557 465 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 UGT2B10P36537 528 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 CLK3P49761 638 aaKnown RBP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 DIO3P55073 304 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 RIPPLY3P57055 190 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 FUT5Q11128 374 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 GANABQ14697 944 aaKnown RBP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 ZNHIT3Q15649 155 aaPredicted RBP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 TSC22D1Q15714 1073 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 BCL2A1Q16548 175 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 EXOC3L2Q2M3D2 409 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 ANXA2RQ3ZCQ2 193 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 C6orf136Q5SQH8 315 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 IL23RQ5VWK5 629 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 CDC73Q6P1J9 531 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 Q71RC1 249 aaPredicted RBP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 RIMKLAQ8IXN7 391 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 ZNF781Q8N8C0 355 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 COX18Q8N8Q8 333 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 CDRT4Q8N9R6 151 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 OR10D3Q8NH80 312 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 GOT1L1Q8NHS2 421 aaPredicted RBP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 ROBO4Q8WZ75 1007 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 TRIM44Q96DX7 344 aaPredicted RBP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 CHMP6Q96FZ7 201 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 PGM2Q96G03 612 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 ZFP3Q96NJ6 502 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 SORT1Q99523 831 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 TRMOQ9BU70 441 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 HDHD5Q9BXW7 423 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 IQCGQ9H095 443 aaKnown RBP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 PIGMQ9H3S5 423 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 ACSS1Q9NUB1 689 aaPredicted RBP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 ZCCHC3Q9NUD5 404 aaKnown RBP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 THAP1Q9NVV9 213 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 HSF4Q9ULV5 492 aa5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 WBP11Q9Y2W2 641 aaKnown RBP5.65□□□□□ -1.5
HMGN1P17-201ENST00000513734 IGHV3-15A0A0B4J1V0 119 aa5.64□□□□□ -1.51
HMGN1P17-201ENST00000513734 NPIPB13A6NJU9 1138 aa5.64□□□□□ -1.51
HMGN1P17-201ENST00000513734 NPIPB5A8MRT5 1133 aa5.64□□□□□ -1.51
HMGN1P17-201ENST00000513734 NPIPB4C9JG80 1138 aa5.64□□□□□ -1.51
HMGN1P17-201ENST00000513734 NPIPB9F8W1W9 429 aa5.64□□□□□ -1.51
HMGN1P17-201ENST00000513734 H3BQF6 201 aa5.64□□□□□ -1.51
HMGN1P17-201ENST00000513734 PLAUP00749 431 aa5.64□□□□□ -1.51
HMGN1P17-201ENST00000513734 NGFRP08138 427 aa5.64□□□□□ -1.51
HMGN1P17-201ENST00000513734 IFI6P09912 130 aa5.64□□□□□ -1.51
HMGN1P17-201ENST00000513734 LINGO3P0C6S8 592 aa5.64□□□□□ -1.51
HMGN1P17-201ENST00000513734 BGNP21810 368 aa5.64□□□□□ -1.51
HMGN1P17-201ENST00000513734 SFTPDP35247 375 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms