RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 HIST2H2AA3Q6FI13 130 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 SHC4Q6S5L8 630 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 TMPRSS11AQ6ZMR5 421 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 LYG2Q86SG7 212 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 CALHM1Q8IU99 346 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 CMTM1Q8IZ96 169 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 RIBC1Q8N443 379 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 OR4K1Q8NGD4 311 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 OR10V1Q8NGI7 309 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 MRAPQ8TCY5 172 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 IFT81Q8WYA0 676 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 S100PBPQ96BU1 408 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 BPIFA2Q96DR5 249 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZIM3Q96PE6 472 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 FRG2BQ96QU4 278 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 TMEM79Q9BSE2 394 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 OR51B5Q9H339 312 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 NMRAL1Q9HBL8 299 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 POPDC2Q9HBU9 364 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZNF221Q9UK13 617 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 COL1A1P02452 1464 aaPredicted RBP5.59□□□□□ -1.52
TRAPPC11-209ENST00000512476 MYH7P12883 1935 aa5.59□□□□□ -1.52
TRAPPC11-209ENST00000512476 SYCE1LA8MT33 242 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 E9PAM4 449 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR7A17O14581 309 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 CCNKO75909 580 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 HLA-DQA2P01906 255 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 GPR1P46091 355 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 RPL21P46778 160 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 MEOX1P50221 254 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 KCNJ2P63252 427 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZXDAP98168 799 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 GANABQ14697 944 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 SMCO1Q147U7 214 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 FGD3Q5JSP0 725 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF776Q68DI1 518 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 LRRN1Q6UXK5 716 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 Q71RC1 249 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 DEFB132Q7Z7B7 95 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 UNC93AQ86WB7 457 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 KIF2BQ8N4N8 673 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR13J1Q8NGT2 312 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZFP28Q8NHY6 868 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 ADAMTS14Q8WXS8 1223 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 BADQ92934 168 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 BORCS5Q969J3 196 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 TEAD3Q99594 435 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 MRPL18Q9H0U6 180 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZC4H2Q9NQZ6 224 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 PAK5Q9P286 719 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 FAM32AQ9Y421 112 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 SAGE2PA6NJ88 616 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 LRRC37AA6NMS7 1700 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 J3QLI3 93 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 CTDNEP1O95476 244 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 COMTP21964 271 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 BTDP43251 543 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 IL18R1Q13478 541 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 SF3A2Q15428 464 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 SFRP4Q6FHJ7 346 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 C5orf46Q6UWT4 87 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 CASP12Q6UXS9 341 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 CYS1Q717R9 158 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 GOLGA7Q7Z5G4 137 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 ISCA2Q86U28 154 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 BBS7Q8IWZ6 715 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 DND1Q8IYX4 353 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 SLC37A3Q8NCC5 494 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF548Q8NEK5 533 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR2AE1Q8NHA4 323 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 PLPPR1Q8TBJ4 325 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 SMARCD2Q92925 531 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 MARC2Q969Z3 335 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 PPWD1Q96BP3 646 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 SGK494Q96LW2 274 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF488Q96MN9 340 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF385AQ96PM9 386 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 MCCC1Q96RQ3 725 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 TIMP4Q99727 224 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 NIPSNAP1Q9BPW8 284 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 GATA5Q9BWX5 397 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 GAREM1Q9H706 876 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 ABCB11O95342 1321 aa5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 RPAP1Q9BWH6 1393 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 MYO5AQ9Y4I1 1855 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 COL11A2P13942 1736 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-209ENST00000512476 A0A1B0GV90 55 aa5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 PRKAB2O43741 272 aa5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 TMPRSS11DO60235 418 aa5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 STK17BO94768 372 aa5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 ATP1A1P05023 1023 aaKnown RBP5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 CALB1P05937 261 aa5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 HOXC6P09630 235 aa5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 CCDC166P0CW27 439 aa5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 BGNP21810 368 aa5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 TAS2R60P59551 318 aa5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 RHOAP61586 193 aa5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 ISXQ2M1V0 245 aa5.57□□□□□ -1.52
TRAPPC11-209ENST00000512476 FAM102AQ5T9C2 384 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms