RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 REXO2Q9Y3B8 237 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 GREB1Q4ZG55 1949 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 DENND4AQ7Z401 1863 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 PPIAL4EA0A075B759 164 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 NPIPA5A0A0B4J1W7 369 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMEM82A0PJX8 343 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMEM213A2RRL7 107 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 EFCAB7A8K855 629 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 NPIPB11E5RHQ5 1161 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 E9PAM4 449 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 NPIPA5E9PKD4 350 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 NPIPA3F8WFD2 350 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMX2-CTNND1H3BSU7 103 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 PSMD12O00232 456 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 ADAM10O14672 748 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 INPP4BO15327 924 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 LATO43561 262 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR7A10O76100 309 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 LDOC1O95751 146 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 EPOP01588 193 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 GAPDHP04406 335 aaKnown RBP4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 RBP1P09455 135 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 PPIAL4FP0DN26 164 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 MATKP42679 507 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR3A3P47888 321 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 RAB13P51153 203 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 NUDT6P53370 316 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 CRYBA4P53673 196 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 PTTG1IPP53801 180 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 SLC7A9P82251 487 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZXDAP98168 799 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 PUDPQ08623 228 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 FOXC1Q12948 553 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 KRR1Q13601 381 aaKnown RBP4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 APOFQ13790 326 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 DPYSL3Q14195 570 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 CERCAMQ5T4B2 595 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 SAMD5Q5TGI4 173 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 OGFOD2Q6N063 350 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 ACSM6Q6P461 480 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 SH2D5Q6ZV89 423 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 ASB18Q6ZVZ8 466 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 PLXDC1Q8IUK5 500 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 WDFY1Q8IWB7 410 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 SFTPA1Q8IWL2 248 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 SYS1Q8N2H4 156 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 FGFRL1Q8N441 504 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 Q8N9G6 341 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 B3GNT7Q8NFL0 401 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 C2CD4CQ8TF44 421 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 MOAP1Q96BY2 351 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 RNF170Q96K19 258 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 MS4A10Q96PG2 267 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 FANCD2OSQ96PS1 177 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 SLC38A2Q96QD8 506 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 DDOQ99489 341 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 KLF16Q9BXK1 252 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR51M1Q9H341 326 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 Q9N2J8 555 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 MYNNQ9NPC7 610 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 SEMA4GQ9NTN9 838 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 LYARQ9NX58 379 aaKnown RBP4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 P2RX2Q9UBL9 471 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 NPIPA1Q9UND3 350 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 PSG11Q9UQ72 335 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 PDE10AQ9Y233 779 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 PPIAL4AQ9Y536 164 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 C17orf100A8MU93 164 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 SULT1C2O00338 296 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 TGOLN2O43493 480 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 OBSL1O75147 1896 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 PRKRAO75569 313 aaKnown RBP4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 VAPBO95292 243 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 C1QTNF9P0C862 333 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 ANXA3P12429 323 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAHP16930 419 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 ATP6V1B2P21281 511 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 NR4A1P22736 598 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 SDC4P31431 198 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 SGSHP51688 502 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZP1P60852 638 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 ERVK-8P63133 956 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 CTBSQ01459 385 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 NFATC2Q13469 925 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 RUNX3Q13761 415 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 PCM1Q15154 2024 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR4D1Q15615 310 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 RFX4Q33E94 735 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAM46CQ5VWP2 391 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 TBC1D26Q86UD7 250 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 CHSY1Q86X52 802 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 PHF13Q86YI8 300 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 CALHM1Q8IU99 346 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 STX19Q8N4C7 294 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZNF808Q8N4W9 903 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 SLC5A8Q8N695 610 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 AMER2Q8N7J2 671 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 CDRT4Q8N9R6 151 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR2AP1Q8NGE2 309 aa4.57□□□□□ -1.68
TRAPPC11-208ENST00000511955 WDR36Q8NI36 951 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms