RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 HIKESHIQ53FT3 197 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 ENTPD8Q5MY95 495 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 FAM91A1Q658Y4 838 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 PATL1Q86TB9 770 aaKnown RBP11.66□□□□□ -0.54
RNF4-215ENST00000511843 SLC30A8Q8IWU4 369 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 C10orf53Q8N6V4 93 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 ZNF611Q8N823 705 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 BHLHE22Q8NFJ8 381 aaPredicted RBP11.66□□□□□ -0.54
RNF4-215ENST00000511843 OR8J3Q8NGG0 315 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 ZNF583Q96ND8 569 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 MUS81Q96NY9 551 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 PIP5K1AQ99755 562 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 GSX1Q9H4S2 264 aaPredicted RBP11.66□□□□□ -0.54
RNF4-215ENST00000511843 SLC7A7Q9UM01 511 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 KPNA4O00629 521 aaPredicted RBP11.65□□□□□ -0.54
RNF4-215ENST00000511843 AIM2O14862 343 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 VAMP5O95183 116 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 SOD3P08294 240 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 ZNF43P17038 809 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 MPGP29372 298 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 PTH2RP49190 550 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 SEC24CP53992 1094 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 TUBA1BP68363 451 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 TUBA4AP68366 448 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 COQ5Q5HYK3 327 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 CARD17Q5XLA6 110 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 TUBA1AQ71U36 451 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 CCDC80Q76M96 950 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 P2RY8Q86VZ1 359 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 WDFY1Q8IWB7 410 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 PIAS4Q8N2W9 510 aaPredicted RBP11.65□□□□□ -0.54
RNF4-215ENST00000511843 POMGNT2Q8NAT1 580 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 ADAMTS16Q8TE57 1224 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 TMEM171Q8WVE6 324 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 FBXW5Q969U6 566 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 Q96MF0 132 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 OXGR1Q96P68 337 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 SMR3AQ99954 134 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 SH3GL1Q99961 368 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 USB1Q9BQ65 265 aaKnown RBP11.65□□□□□ -0.54
RNF4-215ENST00000511843 AMBRA1Q9C0C7 1298 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 FAM107BQ9H098 131 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 DLL4Q9NR61 685 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 SLC17A5Q9NRA2 495 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 SH3GLB1Q9Y371 365 aa11.65□□□□□ -0.54
RNF4-215ENST00000511843 PLCE1Q9P212 2302 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 MS4A18H0YCH9 400 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 TRAF3IP2O43734 574 aaPredicted RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 CHP2O43745 196 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 OR2T1O43869 369 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 FMO6PO60774 539 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 FZD7O75084 574 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 SERPINI2O75830 405 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 C8BP07358 591 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 COX4I1P13073 169 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 NQO1P15559 274 aaKnown RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 GYS2P54840 703 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 CDH11P55287 796 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 C1DQ13901 141 aaKnown RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 PGGHGQ32M88 737 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 MS4A18Q3C1V0 323 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 LRRC23Q53EV4 343 aaPredicted RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 INTS11Q5TA45 600 aaKnown RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 OR7E24Q6IFN5 339 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 ZNF613Q6PF04 617 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 C5orf46Q6UWT4 87 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 LINC00114Q6XXX2 140 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 B3GLCTQ6Y288 498 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 H1FNTQ75WM6 255 aaPredicted RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 YTHDF3Q7Z739 585 aaKnown RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 CARM1Q86X55 608 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 TREML1Q86YW5 311 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 CIARTQ8N365 385 aaPredicted RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 PCYOX1LQ8NBM8 494 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 C1orf162Q8NEQ5 155 aaPredicted RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 SMAP2Q8WU79 429 aaPredicted RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 ZNF837Q96EG3 531 aaPredicted RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 ELAC2Q9BQ52 826 aaKnown RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 EMC6Q9BV81 110 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 ASPNQ9BXN1 380 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 GID8Q9NWU2 228 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 CMTM6Q9NX76 183 aa11.64□□□□□ -0.55
RNF4-215ENST00000511843 MAGED1Q9Y5V3 778 aaPredicted RBP11.64□□□□□ -0.55
RNF4-215ENST00000511843 A0A096LPE4 126 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 A0A1W2PPZ6 126 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 TRIM64A6NGJ6 449 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 TRIM64BA6NI03 449 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 FAM220BPB1ANY3 271 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 ZNF587BE7ETH6 402 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 SEC14L2O76054 403 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 ZNF432O94892 652 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 NPPAP01160 153 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 DANCRP0C864 163 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 CD40P25942 277 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 CDKN1AP38936 164 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 OR1E2P47887 323 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 RPS4XP62701 263 aaKnown RBP11.63□□□□□ -0.55
RNF4-215ENST00000511843 ROR2Q01974 943 aaKnown RBP11.63□□□□□ -0.55
RNF4-215ENST00000511843 TGFBR3Q03167 851 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 PMS2P3Q13401 168 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms