RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 SSX8Q7RTT4 187 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 MICU2Q8IYU8 434 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 POMGNT2Q8NAT1 580 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 OR2T12Q8NG77 320 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 ZNF417Q8TAU3 575 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 MUCL1Q96DR8 90 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 BOD1Q96IK1 185 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 MOGAT1Q96PD6 335 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 ZNF587Q96SQ5 575 aaPredicted RBP14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 EPYCQ99645 322 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 PRSS27Q9BQR3 290 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 AMBRA1Q9C0C7 1298 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 FAM107BQ9H098 131 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 TAS2R16Q9NYV7 291 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 BAG5Q9UL15 447 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 CELSR1Q9NYQ6 3014 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 DSCAMO60469 2012 aa14.19□□□□□ -0.14
PDLIM5-216ENST00000511767 TRAPPC13A5PLN9 417 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 LRRN3E7EW58 273 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 CHP2O43745 196 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 HPRP00739 348 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 ZNF43P17038 809 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 MPGP29372 298 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 SELENOWP63302 87 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 LIPEQ05469 1076 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 OR7E24Q6IFN5 339 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 ADAM5Q6NVV9 412 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 CARM1Q86X55 608 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 IGFBPL1Q8WX77 278 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 PROX1Q92786 737 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 CMTM5Q96DZ9 223 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 ALPK1Q96QP1 1244 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 PIP5K1AQ99755 562 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 ZNF426Q9BUY5 554 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 SLCO5A1Q9H2Y9 848 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 UBTD1Q9HAC8 227 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 MRPL39Q9NYK5 338 aaKnown RBP14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 CORINQ9Y5Q5 1042 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 SLC25A15Q9Y619 301 aa14.18□□□□□ -0.14
PDLIM5-216ENST00000511767 USF3Q68DE3 2245 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 NME4O00746 187 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 PLPP3O14495 311 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 UPK3AO75631 287 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 RAD51DO75771 328 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 TNFRSF1BP20333 461 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 PRDX6P30041 224 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 CLDN17P56750 224 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 GNGT1P63211 74 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 LGALS3BPQ08380 585 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 STK11Q15831 433 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 C9orf135Q5VTT2 229 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 NIPAL3Q6P499 406 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 LINGO2Q7L985 606 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 ARPINQ7Z6K5 226 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 SCAIQ8N9R8 606 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 ADPRHL1Q8NDY3 354 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 PIGTQ969N2 578 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 MPP4Q96JB8 637 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 LINC00470Q9BZP3 86 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 ESRP2Q9H6T0 727 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 BEX4Q9NWD9 120 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 NPAP1Q9NZP6 1156 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 ACANP16112 2415 aa14.17□□□□□ -0.14
PDLIM5-216ENST00000511767 OR6C65A6NJZ3 312 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 DYNC1I1O14576 645 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 CD3EP07766 207 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 HLA-DOBP13765 273 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 GTF2E2P29084 291 aaKnown RBP14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 HOXC12P31275 282 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 OR1E2P47887 323 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 SLC7A2P52569 658 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 PSME3P61289 254 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 TGFBR3Q03167 851 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 BSPH1Q075Z2 132 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 PMS2P3Q13401 168 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 PIN1Q13526 163 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 C1DQ13901 141 aaKnown RBP14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 TTC33Q6PID6 262 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 C20orf204Q6ZNR8 217 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 ZNF611Q8N823 705 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 C1orf162Q8NEQ5 155 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 OR52N5Q8NH56 324 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 AKAP1Q92667 903 aaKnown RBP eCLIP14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 TXNDC15Q96J42 360 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 NSRP1Q9H0G5 558 aaKnown RBP14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 SLC17A5Q9NRA2 495 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 RIMS3Q9UJD0 308 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 SLC7A7Q9UM01 511 aa14.16□□□□□ -0.14
PDLIM5-216ENST00000511767 HEATR1Q9H583 2144 aaKnown RBP14.15□□□□□ -0.14
PDLIM5-216ENST00000511767 A0A1W2PR80 420 aa14.15□□□□□ -0.14
PDLIM5-216ENST00000511767 HS3ST1O14792 307 aa14.15□□□□□ -0.14
PDLIM5-216ENST00000511767 TRAF3IP2O43734 574 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-216ENST00000511767 SHOX2O60902 331 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-216ENST00000511767 CH25HO95992 272 aa14.15□□□□□ -0.14
PDLIM5-216ENST00000511767 MT-ATP6P00846 226 aa14.15□□□□□ -0.14
PDLIM5-216ENST00000511767 PTNP21246 168 aa14.15□□□□□ -0.14
PDLIM5-216ENST00000511767 GSK3BP49841 420 aa14.15□□□□□ -0.14
PDLIM5-216ENST00000511767 ADAM8P78325 824 aa14.15□□□□□ -0.14
PDLIM5-216ENST00000511767 ZP4Q12836 540 aa14.15□□□□□ -0.14
PDLIM5-216ENST00000511767 ZNF74Q16587 644 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms