RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 OXGR1Q96P68 337 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 PRSS27Q9BQR3 290 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 ASPNQ9BXN1 380 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 OR10A4Q9H209 315 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 PLEKHF2Q9H8W4 249 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 B3GAT1Q9P2W7 334 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 RIMS3Q9UJD0 308 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 B3GALT5Q9Y2C3 310 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 AKAP6Q13023 2319 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 HRNRQ86YZ3 2850 aaPredicted RBP12.31□□□□□ -0.44
DDX41-212ENST00000511040 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.31□□□□□ -0.44
DDX41-212ENST00000511040 A0A1W2PR80 420 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 MS4A18H0YCH9 400 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 NDUFAB1O14561 156 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 FZD7O75084 574 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 SERPINI2O75830 405 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 CNOT4O95628 575 aaKnown RBP12.31□□□□□ -0.44
DDX41-212ENST00000511040 ITGA5P08648 1049 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 HLA-DOBP13765 273 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 ZNF43P17038 809 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 CDH2P19022 906 aaPredicted RBP12.31□□□□□ -0.44
DDX41-212ENST00000511040 TCN1P20061 433 aaPredicted RBP12.31□□□□□ -0.44
DDX41-212ENST00000511040 FUT4P22083 530 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 MXRA7P84157 204 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 MS4A18Q3C1V0 323 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 NKAIN4Q8IVV8 208 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 FITM2Q8N6M3 262 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 ANKS4BQ8N8V4 417 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 OR6S1Q8NH40 331 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 PFN4Q8NHR9 129 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 TMEM255BQ8WV15 326 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 LZICQ8WZA0 190 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 HSD17B8Q92506 261 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 PLPPR2Q96GM1 343 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 HSH2DQ96JZ2 352 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 SLCO5A1Q9H2Y9 848 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 RHCGQ9UBD6 479 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 MALT1Q9UDY8 824 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 ST6GALNAC2Q9UJ37 374 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 ADAM21Q9UKJ8 722 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 SNX13Q9Y5W8 968 aa12.31□□□□□ -0.44
DDX41-212ENST00000511040 TEP1Q99973 2627 aaKnown RBP12.31□□□□□ -0.44
DDX41-212ENST00000511040 CREBBPQ92793 2442 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 SPG11Q96JI7 2443 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 C11orf98E9PRG8 122 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 J3KTA2 159 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 UPK3AO75631 287 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 KRT33AO76009 404 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 OR5F1O95221 314 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 GOSR1O95249 250 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 PLAUP00749 431 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 AHCYP23526 432 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 MSX2P35548 267 aaPredicted RBP12.3□□□□□ -0.44
DDX41-212ENST00000511040 UGT2B15P54855 530 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 MFSD13AQ14CX5 517 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 ZNF74Q16587 644 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 BEX5Q5H9J7 111 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 CARD17Q5XLA6 110 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 FKBP9P1Q75LS8 142 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 CBLL1Q75N03 491 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 UEVLDQ8IX04 471 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 PGAM4Q8N0Y7 254 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 LRRC17Q8N6Y2 441 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 SCAIQ8N9R8 606 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 OR52N5Q8NH56 324 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 MPP4Q96JB8 637 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 ALKBH3Q96Q83 286 aaPredicted RBP12.3□□□□□ -0.44
DDX41-212ENST00000511040 CDRT15Q96T59 188 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 AMBRA1Q9C0C7 1298 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 UBTD1Q9HAC8 227 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 MRPL39Q9NYK5 338 aaKnown RBP12.3□□□□□ -0.44
DDX41-212ENST00000511040 TAS2R16Q9NYV7 291 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 CORINQ9Y5Q5 1042 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 V9GYQ6 96 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 CSMD2Q7Z408 3487 aa12.3□□□□□ -0.44
DDX41-212ENST00000511040 OR5H1A6NKK0 313 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 ENO4A6NNW6 628 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 PDLIM1O00151 329 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 PLPP3O14495 311 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 TRAF3IP2O43734 574 aaPredicted RBP12.29□□□□□ -0.44
DDX41-212ENST00000511040 PIP5K1CO60331 668 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 IFNW1P05000 195 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 UMPSP11172 480 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 IST1P53990 364 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 POU3F1Q03052 451 aaPredicted RBP12.29□□□□□ -0.44
DDX41-212ENST00000511040 KRT72Q14CN4 511 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 PPA1Q15181 289 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 GABRA6Q16445 453 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 IFI44LQ53G44 452 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 GLYATQ6IB77 296 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 SEZ6L2Q6UXD5 910 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 PAMR1Q6UXH9 720 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 LINGO2Q7L985 606 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 MEX3DQ86XN8 651 aaKnown RBP12.29□□□□□ -0.44
DDX41-212ENST00000511040 WDFY1Q8IWB7 410 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 DEFB107AQ8IZN7 70 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 POMGNT2Q8NAT1 580 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 ADPRHL1Q8NDY3 354 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 OR5J2Q8NH18 312 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 GEMIN6Q8WXD5 167 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms