RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 GRIP1Q9Y3R0 1128 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 CMAHPQ9Y471 501 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 SPEF1Q9Y4P9 236 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 TGP01266 2768 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 TMEM89A2RUT3 159 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 A8MVM7 634 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 SEC14L2O76054 403 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 DBIP07108 87 aaKnown RBP13.78□□□□□ -0.2
CXCL1-202ENST00000509101 MSMBP08118 114 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 GSTA3Q16772 222 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 MSMPQ1L6U9 139 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 SMU1Q2TAY7 513 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 ELFN2Q5R3F8 820 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 PEG10Q86TG7 708 aaKnown RBP13.78□□□□□ -0.2
CXCL1-202ENST00000509101 ZNF440Q8IYI8 595 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 KDM8Q8N371 416 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 TESCQ96BS2 214 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 MRPL37Q9BZE1 423 aaKnown RBP13.78□□□□□ -0.2
CXCL1-202ENST00000509101 AKTIPQ9H8T0 292 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 PCDHB10Q9UN67 800 aa13.78□□□□□ -0.2
CXCL1-202ENST00000509101 TLDC2A0PJX2 215 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 CDHR4A6H8M9 788 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 TMEM229AB2RXF0 380 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 TRIM77I1YAP6 450 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 M0R233 179 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 WNT9BO14905 357 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 SLC43A1O75387 559 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 TFP02787 698 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 HPXP02790 462 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 NR2F1P10589 423 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 PNMTP11086 282 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 TCN1P20061 433 aaPredicted RBP13.77□□□□□ -0.21
CXCL1-202ENST00000509101 EPHA1P21709 976 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 ARR3P36575 388 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 ACAA2P42765 397 aaKnown RBP13.77□□□□□ -0.21
CXCL1-202ENST00000509101 HILS1P60008 231 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 COPZ1P61923 177 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 CEACAM16Q2WEN9 425 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 WBP2NLQ6ICG8 309 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF836Q6ZNA1 936 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 VRK2Q86Y07 508 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 PEX5LQ8IYB4 626 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 GPR137CQ8N3F9 429 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 OR51F2Q8NH61 342 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 PNPT1Q8TCS8 783 aaKnown RBP13.77□□□□□ -0.21
CXCL1-202ENST00000509101 TCP10LQ8TDR4 215 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 FAM216AQ8WUB2 273 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.77□□□□□ -0.21
CXCL1-202ENST00000509101 MRPL24Q96A35 216 aaKnown RBP13.77□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF837Q96EG3 531 aaPredicted RBP13.77□□□□□ -0.21
CXCL1-202ENST00000509101 MTHFD2LQ9H903 347 aaPredicted RBP13.77□□□□□ -0.21
CXCL1-202ENST00000509101 GPR35Q9HC97 309 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 TREM2Q9NZC2 230 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 USP22Q9UPT9 525 aa13.77□□□□□ -0.21
CXCL1-202ENST00000509101 RPL36A-HNRNPH2H7BZ11 118 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 SYNGR3O43761 229 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF432O94892 652 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 AHSA1O95433 338 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 TFPTP0C1Z6 253 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 GAAP10253 952 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 COL8A2P25067 703 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 GTF2E2P29084 291 aaKnown RBP13.76□□□□□ -0.21
CXCL1-202ENST00000509101 ALDH3B1P43353 468 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 ANXA11P50995 505 aaKnown RBP13.76□□□□□ -0.21
CXCL1-202ENST00000509101 POU3F1Q03052 451 aaPredicted RBP13.76□□□□□ -0.21
CXCL1-202ENST00000509101 DPY19L1Q2PZI1 675 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 LIN52Q52LA3 116 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 COX20Q5RI15 118 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 ATG16L1Q676U5 607 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 AENQ8WTP8 325 aaKnown RBP13.76□□□□□ -0.21
CXCL1-202ENST00000509101 SLC25A36Q96CQ1 311 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 MS4A3Q96HJ5 214 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 CCDC115Q96NT0 180 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 ZIM3Q96PE6 472 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 SYT3Q9BQG1 590 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 RBM4Q9BWF3 364 aaKnown RBP13.76□□□□□ -0.21
CXCL1-202ENST00000509101 REV1Q9UBZ9 1251 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 SEC14L4Q9UDX3 406 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 RCE1Q9Y256 329 aa13.76□□□□□ -0.21
CXCL1-202ENST00000509101 WNK2Q9Y3S1 2297 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 FTCDNL1E5RQL4 147 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 E9PBE3 544 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 NPIPB7O75200 414 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 PNPP00491 289 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 NUDT17P0C025 328 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 PRG2P13727 222 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 CREB1P16220 341 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF43P17038 809 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 NCF2P19878 526 aaPredicted RBP13.75□□□□□ -0.21
CXCL1-202ENST00000509101 ACHEP22303 614 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 NR4A1P22736 598 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 S100A3P33764 101 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 CDKN2CP42773 168 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 CLNS1AP54105 237 aaKnown RBP13.75□□□□□ -0.21
CXCL1-202ENST00000509101 MAD2L1BPQ15013 274 aaPredicted RBP13.75□□□□□ -0.21
CXCL1-202ENST00000509101 SLC9B1Q4ZJI4 515 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 WDR93Q6P2C0 686 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 FAHD2BQ6P2I3 314 aaPredicted RBP13.75□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF781Q8N8C0 355 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms