RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 NUDCD3Q8IVD9 361 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 GPR137CQ8N3F9 429 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 CADM2Q8N3J6 435 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 ANKFN1Q8N957 763 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 PIK3C3Q8NEB9 887 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 OR52P1PQ8NH57 321 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 MFSD8Q8NHS3 518 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 TCP10LQ8TDR4 215 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 GCDHQ92947 438 aaPredicted RBP8.66□□□□□ -1.02
SH3D21-206ENST00000508854 TMEM186Q96B77 213 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 CCDC115Q96NT0 180 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 PANX1Q96RD7 426 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 DENND2DQ9H6A0 471 aaPredicted RBP8.66□□□□□ -1.02
SH3D21-206ENST00000508854 SLC17A7Q9P2U7 560 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 REV1Q9UBZ9 1251 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.66□□□□□ -1.02
SH3D21-206ENST00000508854 NOX1Q9Y5S8 564 aa8.66□□□□□ -1.02
SH3D21-206ENST00000508854 IGHV2OR16-5A0A0B4J2B6 119 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 TMEM129A0AVI4 362 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 PRAMEF27A3QJZ7 478 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 TMEM247A6NEH6 219 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 TMEM229AB2RXF0 380 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 M0R233 179 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 FRS3O43559 492 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 OR2T1O43869 369 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 VENTXO95231 258 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 MSMBP08118 114 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 LBPP18428 481 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 ACHEP22303 614 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 IL2RGP31785 369 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 GPR6P46095 362 aaPredicted RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 CAPZA2P47755 286 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 LIMS1P48059 325 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 P2RY4P51582 365 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 CLDN17P56750 224 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 RPS23P62266 143 aaKnown RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 TUBA1BP68363 451 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 TUBA4AP68366 448 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 MRPS11P82912 194 aaKnown RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 ARF1P84077 181 aaKnown RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 PLAURQ03405 335 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 LGALS3BPQ08380 585 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 IFFO1Q0D2I5 559 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 NPRL3Q12980 569 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 SNTB2Q13425 540 aaKnown RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 C1DQ13901 141 aaKnown RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 CCNIQ14094 377 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 PDCD2Q16342 344 aaPredicted RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 TRMT5Q32P41 509 aaKnown RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 FAM174BQ3ZCQ3 159 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 MMEL1Q495T6 779 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 SPANXN4Q5MJ08 99 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 C5orf46Q6UWT4 87 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 ZNF621Q6ZSS3 439 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 TUBA1AQ71U36 451 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 OR51F2Q8NH61 342 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 FAM216AQ8WUB2 273 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 RDH5Q92781 318 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 OXGR1Q96P68 337 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 RBM4Q9BWF3 364 aaKnown RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 ZNF416Q9BWM5 594 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 ROPN1BQ9BZX4 212 aaPredicted RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 ROPN1Q9HAT0 212 aaPredicted RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 CRLF2Q9HC73 371 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 HIF1ANQ9NWT6 349 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 THUMPD1Q9NXG2 353 aaKnown RBP8.65□□□□□ -1.02
SH3D21-206ENST00000508854 P2RX2Q9UBL9 471 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 FBXL3Q9UKT7 428 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 PCDHB10Q9UN67 800 aa8.65□□□□□ -1.02
SH3D21-206ENST00000508854 TENM1Q9UKZ4 2725 aa8.65□□□□□ -1.03
SH3D21-206ENST00000508854 TRAV20A0A0B4J274 112 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 TMEM89A2RUT3 159 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 ZNF99A8MXY4 864 aaPredicted RBP8.64□□□□□ -1.03
SH3D21-206ENST00000508854 FAM157AC9JC47 383 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 AIM2O14862 343 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 WIPF1O43516 503 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 ZNF500O60304 480 aaPredicted RBP8.64□□□□□ -1.03
SH3D21-206ENST00000508854 SPAG7O75391 227 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 ZNF432O94892 652 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 SAGP10523 405 aaPredicted RBP8.64□□□□□ -1.03
SH3D21-206ENST00000508854 NR4A1P22736 598 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 LSP1P33241 339 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 GLRXP35754 106 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 ACAA2P42765 397 aaKnown RBP8.64□□□□□ -1.03
SH3D21-206ENST00000508854 RPL14P50914 215 aaKnown RBP8.64□□□□□ -1.03
SH3D21-206ENST00000508854 CRISP3P54108 245 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 SELENOVP59797 346 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 GALK2Q01415 458 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 BNIP2Q12982 314 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 TRIP10Q15642 601 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 PDCD4Q53EL6 469 aaKnown RBP8.64□□□□□ -1.03
SH3D21-206ENST00000508854 RNF220Q5VTB9 566 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 LINGO2Q7L985 606 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 NET1Q7Z628 596 aaPredicted RBP8.64□□□□□ -1.03
SH3D21-206ENST00000508854 GSPT2Q8IYD1 628 aaKnown RBP8.64□□□□□ -1.03
SH3D21-206ENST00000508854 CDK20Q8IZL9 346 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 ZCCHC24Q8N2G6 241 aaKnown RBP8.64□□□□□ -1.03
SH3D21-206ENST00000508854 SEMA6DQ8NFY4 1073 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 MGARPQ8TDB4 240 aa8.64□□□□□ -1.03
SH3D21-206ENST00000508854 SLC35B4Q969S0 331 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms