RNA–Protein interactions for RNA: ENST00000508130.5

SLF1-207, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 1,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-207ENST00000508130 OR10G3Q8NGC4 313 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 OR4K17Q8NGC6 315 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 OR52R1Q8NGF1 315 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 ZNF675Q8TD23 568 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 C16orf78Q8WTQ4 265 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 AKAP1Q92667 903 aaKnown RBP eCLIP3.16□□□□□ -1.9
SLF1-207ENST00000508130 PIGTQ969N2 578 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 ADIPOR1Q96A54 375 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 MOAP1Q96BY2 351 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 ELP4Q96EB1 424 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 URB1-AS1Q96HZ7 61 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 PPP3R2Q96LZ3 170 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 ZIM3Q96PE6 472 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 CITED2Q99967 270 aaPredicted RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 MECRQ9BV79 373 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 SFXN3Q9BWM7 321 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 POLDIP3Q9BY77 421 aaKnown RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 MRPL1Q9BYD6 325 aaKnown RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 HES7Q9BYE0 225 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 TBL1XR1Q9BZK7 514 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 SPNS1Q9H2V7 528 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 CDC42EP4Q9H3Q1 356 aaKnown RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 SH2D2AQ9NP31 389 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 MID1IP1Q9NPA3 183 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 UBQLN4Q9NRR5 601 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 SERINC1Q9NRX5 453 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 SNTG1Q9NSN8 517 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 PNPLA3Q9NST1 481 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 ACSS1Q9NUB1 689 aaPredicted RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 DDX18Q9NVP1 670 aaKnown RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 C1orf109Q9NX04 203 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 CHCHD3Q9NX63 227 aaKnown RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 TEX10Q9NXF1 929 aaPredicted RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 GIN1Q9NXP7 522 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 MRPL15Q9P015 296 aaKnown RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 ZNF639Q9UID6 485 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 KCNG2Q9UJ96 466 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 IKZF3Q9UKT9 509 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 CES1P1Q9UKY3 287 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 FAF1Q9UNN5 650 aaPredicted RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 ABCG2Q9UNQ0 655 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 DLGAP4Q9Y2H0 992 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 CCL27Q9Y4X3 112 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 PTGDR2Q9Y5Y4 395 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 AP4B1Q9Y6B7 739 aa3.16□□□□□ -1.9
SLF1-207ENST00000508130 CHCHD2Q9Y6H1 151 aaPredicted RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 RP1L1Q8IWN7 2480 aaPredicted RBP3.16□□□□□ -1.9
SLF1-207ENST00000508130 USP9YO00507 2555 aaPredicted RBP3.15□□□□□ -1.9
SLF1-207ENST00000508130 SEC16AO15027 2179 aa3.15□□□□□ -1.9
SLF1-207ENST00000508130 LRBAP50851 2863 aa3.15□□□□□ -1.9
SLF1-207ENST00000508130 ADGRG4Q8IZF6 3080 aa3.15□□□□□ -1.9
SLF1-207ENST00000508130 ZFC3H1O60293 1989 aaKnown RBP3.15□□□□□ -1.91
SLF1-207ENST00000508130 TRAV34A0A0B4J273 112 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 MBD3L5A6NJ08 208 aaPredicted RBP3.15□□□□□ -1.91
SLF1-207ENST00000508130 FAM90A7PA6NKC0 464 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 SH2D7A6NKC9 451 aaPredicted RBP3.15□□□□□ -1.91
SLF1-207ENST00000508130 A8MT66 165 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 FAM90A22PA8MWA6 464 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 FAM90A12PA8MX19 464 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 FAM90A23PA8MXZ1 464 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 MYO1GB0I1T2 1018 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 INAFM1C9JVW0 142 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 C16orf97H3BN30 126 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 AZIN1O14977 448 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 EMC8O43402 210 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 PRKNO60260 465 aaPredicted RBP3.15□□□□□ -1.91
SLF1-207ENST00000508130 TBX19O60806 448 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 RSL1D1O76021 490 aaKnown RBP3.15□□□□□ -1.91
SLF1-207ENST00000508130 OR4F21O95013 312 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 TBX6O95947 436 aaPredicted RBP3.15□□□□□ -1.91
SLF1-207ENST00000508130 GBAP04062 536 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 VIMP08670 466 aaKnown RBP3.15□□□□□ -1.91
SLF1-207ENST00000508130 RPS17P08708 135 aaKnown RBP3.15□□□□□ -1.91
SLF1-207ENST00000508130 ALOX5P09917 674 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 SELLP14151 372 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 PRPS1L1P21108 318 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 S1PR1P21453 382 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 TBXA2RP21731 343 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 DPP4P27487 766 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 DUSP1P28562 367 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 ALDH3A1P30838 453 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 GABRA3P34903 492 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 HPCAL1P37235 193 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 MAGEA8P43361 318 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 TRPC1P48995 793 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 DNASE1L1P49184 302 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 EMDP50402 254 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 NCBP2P52298 156 aaKnown RBP eCLIP3.15□□□□□ -1.913e-9■■■■■ 31.3
SLF1-207ENST00000508130 HNRNPFP52597 415 aaKnown RBP3.15□□□□□ -1.91
SLF1-207ENST00000508130 EFNA3P52797 238 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 CTBP2P56545 445 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 CARD18P57730 90 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 FBXW4P57775 412 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 HMGCS1Q01581 520 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 ROR2Q01974 943 aaKnown RBP3.15□□□□□ -1.91
SLF1-207ENST00000508130 GNA13Q14344 377 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 ZSWIM7Q19AV6 140 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 ATP6AP1LQ52LC2 224 aa3.15□□□□□ -1.91
SLF1-207ENST00000508130 TRMT12Q53H54 448 aaKnown RBP3.15□□□□□ -1.91
SLF1-207ENST00000508130 UNC50Q53HI1 259 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms