RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 PRR5P85299 388 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 EMX1Q04741 257 aaPredicted RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 LIPEQ05469 1076 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 SCN1BQ07699 218 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 C17orf67Q0P5P2 114 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 TNK1Q13470 666 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 GANABQ14697 944 aaKnown RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 TAB1Q15750 504 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 TBCEQ15813 527 aaPredicted RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 SPATC1Q76KD6 591 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 ZNF551Q7Z340 670 aaPredicted RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 WDR53Q7Z5U6 358 aaPredicted RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 CDH24Q86UP0 819 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 KIF18BQ86Y91 864 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 CLIP4Q8N3C7 705 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 FADS6Q8N9I5 356 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 CDRT4Q8N9R6 151 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 NAXEQ8NCW5 288 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 OR2T11Q8NH01 316 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 CDC26Q8NHZ8 85 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 HTRA1Q92743 480 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 RNASE6Q93091 150 aaKnown RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 MYDGFQ969H8 173 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 PPCDCQ96CD2 204 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 PPP3R2Q96LZ3 170 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 TRIB1Q96RU8 372 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 DGCR6LQ9BY27 220 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 SLC22A4Q9H015 551 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 DCSTAMPQ9H295 470 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 TOR3AQ9H497 397 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 PTGES2Q9H7Z7 377 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 PLCXD1Q9NUJ7 323 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 JKAMPQ9P055 326 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 PPP4R1LQ9P1A2 415 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 RABL2AQ9UBK7 228 aaPredicted RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 ENOPH1Q9UHY7 261 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 ATP6V1HQ9UI12 483 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 FBXL2Q9UKC9 423 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 TMA7Q9Y2S6 64 aaKnown RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 IGLV3-32A0A0A0MS00 114 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 FAM234BA2RU67 622 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 LINC00862A6NCI5 91 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 FXYD1O00168 92 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 CCRL2O00421 344 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 SEC14L5O43304 696 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 EMC8O43402 210 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 NME6O75414 186 aaPredicted RBP7.23□□□□□ -1.25
SCN1A-207ENST00000507401 CTAG2O75638 210 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 GHRHP01286 108 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 CRHP06850 196 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 NGFRP08138 427 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 HTR1AP08908 422 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 BCKDHAP12694 445 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 PEPDP12955 493 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 ZNF708P17019 499 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 C4BPBP20851 252 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 NR4A1P22736 598 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 GABRA3P34903 492 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 EVI2BP34910 448 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 NR4A2P43354 598 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 SLC9A3P48764 834 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 ETV1P50549 477 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 ZNF136P52737 540 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 DIO3P55073 304 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 CLDN18P56856 261 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 B3GALT5-AS1P59052 145 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 GALK2Q01415 458 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 CD47Q08722 323 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 ZNF155Q12901 538 aaPredicted RBP7.23□□□□□ -1.25
SCN1A-207ENST00000507401 MYBPHQ13203 477 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 CDK5R2Q13319 367 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 NFYCQ13952 458 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 DAZAP2Q15038 168 aaPredicted RBP7.23□□□□□ -1.25
SCN1A-207ENST00000507401 TSC22D1Q15714 1073 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 XKR7Q5GH72 579 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 DCST1Q5T197 706 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 OR5M10Q6IEU7 315 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 OR2A2Q6IF42 318 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 STK32CQ86UX6 486 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 FUNDC1Q8IVP5 155 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 MICU2Q8IYU8 434 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 RELL2Q8NC24 303 aaPredicted RBP7.23□□□□□ -1.25
SCN1A-207ENST00000507401 OR2M3Q8NG83 312 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 OR4K17Q8NGC6 315 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 FAM110BQ8TC76 370 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 DUSP19Q8WTR2 217 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 FAM222BQ8WU58 562 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 TWIST2Q8WVJ9 160 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 WFDC12Q8WWY7 111 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 RNF145Q96MT1 663 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 SFXN2Q96NB2 322 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 WDFY2Q96P53 400 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 TSSK3Q96PN8 268 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 SFXN3Q9BWM7 321 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 CMTM6Q9NX76 183 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 ING3Q9NXR8 418 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 SH3BP4Q9P0V3 963 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 SEC14L4Q9UDX3 406 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 EDARQ9UNE0 448 aa7.23□□□□□ -1.25
SCN1A-207ENST00000507401 PTGDR2Q9Y5Y4 395 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms