RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 RPS26P11Q5JNZ5 115 aaPredicted RBP11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 RNF220Q5VTB9 566 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 PRAMEF8Q5VWM4 474 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 PRAMEF7Q5VXH5 474 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 ATG16L1Q676U5 607 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 TUBA1AQ71U36 451 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 SERPINA11Q86U17 422 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 ANKS4BQ8N8V4 417 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 STK35Q8TDR2 534 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 SLC25A36Q96CQ1 311 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 TMEM19Q96HH6 336 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 SPATA9Q9BWV2 254 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 CA10Q9NS85 328 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 THAP1Q9NVV9 213 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 RASD1Q9Y272 281 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 FKBP7Q9Y680 259 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 A0A096LPE4 126 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 A0A096LPI6 279 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 ARPC4-TTLL3A0A0A6YYG9 625 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 IGHV4-61A0A0C4DH41 118 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 A0A1W2PPZ6 126 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 OR6C65A6NJZ3 312 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 B9A039 149 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 NDUFS8O00217 210 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 SNNO75324 88 aaPredicted RBP11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 AHSA1O95433 338 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 IDO1P14902 403 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 PAX7P23759 505 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 CLDN17P56750 224 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 SNRPD2P62316 118 aaKnown RBP11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 HOXC5Q00444 222 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 NAAAQ02083 359 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 IQCCQ4KMZ1 466 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 SLC9B1Q4ZJI4 515 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 VHLLQ6RSH7 139 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 SLC46A3Q7Z3Q1 461 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 RFLNBQ8N5W9 214 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 MFSD8Q8NHS3 518 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 MAGEE2Q8TD90 523 aaPredicted RBP11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 ALKBH3Q96Q83 286 aaPredicted RBP11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 KATNB1Q9BVA0 655 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 LINC00470Q9BZP3 86 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 ARMC7Q9H6L4 198 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 CRNNQ9UBG3 495 aaPredicted RBP11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 IFT52Q9Y366 437 aa11.64□□□□□ -0.55
POLR2J3-212ENST00000507355 LOC390937A0A1W2PQ73 354 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 TMEM247A6NEH6 219 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 TMEM229AB2RXF0 380 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 FTCDNL1E5RQL4 147 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 SLCO1B7G3V0H7 640 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 NUDT7P0C024 238 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 OR4A8P0C604 315 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 CECR9P0C854 216 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 PNMTP11086 282 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 HOXB1P14653 301 aaPredicted RBP11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 ZNF43P17038 809 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 CALCRP30988 508 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 SRP14P37108 136 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 RPS5P46782 204 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 ARF1P84077 181 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 ROR2Q01974 943 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 EGR4Q05215 589 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 ADIPOQQ15848 244 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 ZNF311Q5JNZ3 666 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 MGARPQ8TDB4 240 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 VPS33AQ96AX1 596 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 ITCHQ96J02 903 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 MAELQ96JY0 434 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 SOX7Q9BT81 388 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 NELFAQ9H3P2 528 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 RMND5AQ9H871 391 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 SEC61A2Q9H9S3 476 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 CACYBPQ9HB71 228 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 THUMPD1Q9NXG2 353 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 ZIM2Q9NZV7 527 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 PKD1L1Q8TDX9 2849 aa11.63□□□□□ -0.55
POLR2J3-212ENST00000507355 TMEM120BA0PK00 339 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 RPL36A-HNRNPH2H7BZ11 118 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 PDE5AO76074 875 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 IGLV1-44P01699 117 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 CBR1P16152 277 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 POLR2JP52435 117 aaKnown RBP11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 HGFACQ04756 655 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 RGNQ15493 299 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 EFNB3Q15768 340 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 C3orf36Q3SXR2 165 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 C6orf10Q5SRN2 563 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 MSANTD1Q6ZTZ1 278 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 CROCCP2Q86T23 111 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 OR4F15Q8NGB8 312 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 OR9I1Q8NGQ6 314 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 KTI12Q96EK9 354 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 OXGR1Q96P68 337 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 ZNF317Q96PQ6 595 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 OR52B2Q96RD2 323 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 PTDSS2Q9BVG9 487 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 PLK3Q9H4B4 646 aa11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 MYOZ1Q9NP98 299 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 SDR39U1Q9NRG7 319 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-212ENST00000507355 RPS6KB2Q9UBS0 482 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms