RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 VLDLRP98155 873 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 MS4A2Q01362 244 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 PIN1Q13526 163 aaPredicted RBP7.54□□□□□ -1.2
PDGFC-205ENST00000506880 OR7A5Q15622 319 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 OTUD3Q5T2D3 398 aaPredicted RBP7.54□□□□□ -1.2
PDGFC-205ENST00000506880 GPR139Q6DWJ6 353 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 OR7E24Q6IFN5 339 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 C1orf94Q6P1W5 598 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 ZNF730Q6ZMV8 503 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 Q6ZT83 130 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 SEM1Q6ZVN7 128 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 ADGRG5Q8IZF4 528 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 SVOPLQ8N434 492 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 C17orf78Q8N4C9 275 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 MARVELD2Q8N4S9 558 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 C9orf106Q8NAJ2 232 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 OR9K2Q8NGE7 335 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 OR4D11Q8NGI4 311 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 SLC7A13Q8TCU3 470 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 TAAR8Q969N4 342 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 SDCCAG3Q96C92 435 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 CCDC124Q96CT7 223 aaKnown RBP7.54□□□□□ -1.2
PDGFC-205ENST00000506880 BPIFA2Q96DR5 249 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 ZNF845Q96IR2 970 aaPredicted RBP7.54□□□□□ -1.2
PDGFC-205ENST00000506880 RSRC1Q96IZ7 334 aaKnown RBP7.54□□□□□ -1.2
PDGFC-205ENST00000506880 CLPTM1LQ96KA5 538 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 DGCR6LQ9BY27 220 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 SRXN1Q9BYN0 137 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 SMURF2Q9HAU4 748 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 B3GAT2Q9NPZ5 323 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 MAN2C1Q9NTJ4 1040 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 C6orf203Q9P0P8 240 aaPredicted RBP7.54□□□□□ -1.2
PDGFC-205ENST00000506880 MALT1Q9UDY8 824 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 Q9UFV3 132 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 PROCRQ9UNN8 238 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 USP22Q9UPT9 525 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 MGAT4BQ9UQ53 548 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 BAIAP2Q9UQB8 552 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 GPR52Q9Y2T5 361 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 FLVCR1Q9Y5Y0 555 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 ADGRG4Q8IZF6 3080 aa7.54□□□□□ -1.2
PDGFC-205ENST00000506880 A0A087WUU8 490 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 A0A1W2PNR3 127 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 A0A1W2PRG6 482 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 ZC3H12DA2A288 527 aaKnown RBP7.53□□□□□ -1.2
PDGFC-205ENST00000506880 A6NIZ1 184 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 C17orf51A8MQB3 221 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 PLPP3O14495 311 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 IMPA2O14732 288 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 GMFGO60234 142 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 SEMA7AO75326 666 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 FKBP6O75344 327 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 MRPL33O75394 65 aaKnown RBP7.53□□□□□ -1.2
PDGFC-205ENST00000506880 PDE5AO76074 875 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 AQP8O94778 261 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 TOXO94900 526 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 TGM6O95932 706 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 ADAP00813 363 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 CST1P01037 141 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 CGAP01215 116 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 ANXA8P13928 327 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 FASP25445 335 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 DNAJA1P31689 397 aaKnown RBP7.53□□□□□ -1.2
PDGFC-205ENST00000506880 UQCRC1P31930 480 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 RPS5P46782 204 aaKnown RBP7.53□□□□□ -1.2
PDGFC-205ENST00000506880 CENPAP49450 140 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 RAP1BP61224 184 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 RAP1AP62834 184 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 TSPAN31Q12999 210 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 PMS2P3Q13401 168 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 ZSCAN26Q16670 478 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 C3orf36Q3SXR2 165 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 POMZP3Q6PJE2 187 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 ZNF627Q7L945 461 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 NANOGNBQ7Z5D8 188 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 SPATA24Q86W54 205 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 HIPK1Q86Z02 1210 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 UEVLDQ8IX04 471 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 FAM169BQ8N8A8 192 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 STEAP2Q8NFT2 490 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 OR5M1Q8NGP8 315 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 OR6X1Q8NH79 312 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 MAGEE2Q8TD90 523 aaPredicted RBP7.53□□□□□ -1.2
PDGFC-205ENST00000506880 APH1AQ96BI3 265 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 ZNF524Q96C55 264 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 STARD4Q96DR4 205 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 KTI12Q96EK9 354 aaPredicted RBP7.53□□□□□ -1.2
PDGFC-205ENST00000506880 ALPK1Q96QP1 1244 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 CHID1Q9BWS9 393 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 TEX12Q9BXU0 123 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 OR11A1Q9GZK7 315 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 TMEM185BQ9H7F4 350 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 NGBQ9NPG2 151 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 MEPEQ9NQ76 525 aaPredicted RBP7.53□□□□□ -1.2
PDGFC-205ENST00000506880 FBXL3Q9UKT7 428 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 AURKCQ9UQB9 309 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 NOSIPQ9Y314 301 aaKnown RBP7.53□□□□□ -1.2
PDGFC-205ENST00000506880 MAGED1Q9Y5V3 778 aaPredicted RBP7.53□□□□□ -1.2
PDGFC-205ENST00000506880 LYVE1Q9Y5Y7 322 aa7.53□□□□□ -1.2
PDGFC-205ENST00000506880 TENM4Q6N022 2769 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms