RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SPRYD4Q8WW59 207 aaPredicted RBP4.38□□□□□ -1.71
HERC4-213ENST00000506515 RPL3LQ92901 407 aaKnown RBP4.38□□□□□ -1.71
HERC4-213ENST00000506515 FGF14Q92915 247 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 ZNF707Q96C28 371 aaPredicted RBP4.38□□□□□ -1.71
HERC4-213ENST00000506515 NOL4LQ96MY1 436 aaPredicted RBP4.38□□□□□ -1.71
HERC4-213ENST00000506515 MBOAT7Q96N66 472 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 OR5B2Q96R09 309 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 RIT2Q99578 217 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 ERP44Q9BS26 406 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 DUSP16Q9BY84 665 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 CAB39LQ9H9S4 337 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 C6orf50Q9HD87 102 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 GNG12Q9UBI6 72 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 SAMD4AQ9UPU9 718 aaKnown RBP4.38□□□□□ -1.71
HERC4-213ENST00000506515 FRYQ5TBA9 3013 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 DMXL2Q8TDJ6 3036 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 DSPP15924 2871 aaKnown RBP4.38□□□□□ -1.71
HERC4-213ENST00000506515 ASXL3Q9C0F0 2248 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 IGLV8-61A0A075B6I0 122 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 CDX4O14627 284 aaPredicted RBP4.37□□□□□ -1.71
HERC4-213ENST00000506515 TBX19O60806 448 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 N4BP1O75113 896 aaKnown RBP4.37□□□□□ -1.71
HERC4-213ENST00000506515 BCAS1O75363 584 aaPredicted RBP4.37□□□□□ -1.71
HERC4-213ENST00000506515 GPX5O75715 221 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 SERPINA2P20848 420 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 NT5EP21589 574 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 UQCRC2P22695 453 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 ADORA2BP29275 332 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 OTUD4Q01804 1114 aaKnown RBP4.37□□□□□ -1.71
HERC4-213ENST00000506515 PLD1Q13393 1074 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 SELPLGQ14242 412 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 NDUFA9Q16795 377 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 TATDN3Q17R31 274 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 PAGE2BQ5JRK9 111 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 OLFML2AQ68BL7 652 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 TPGS2Q68CL5 300 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 ZNF677Q86XU0 584 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 MFSD6LQ8IWD5 586 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 ZNF540Q8NDQ6 660 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 OR13F1Q8NGS4 319 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 ZNF461Q8TAF7 563 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 AENQ8WTP8 325 aaKnown RBP4.37□□□□□ -1.71
HERC4-213ENST00000506515 CTNNBL1Q8WYA6 563 aaPredicted RBP4.37□□□□□ -1.71
HERC4-213ENST00000506515 SLC6A7Q99884 636 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 ALG12Q9BV10 488 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 PPDPFQ9H3Y8 114 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 RMND5AQ9H871 391 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 ELOVL3Q9HB03 270 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 TMEM9BQ9NQ34 198 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 TNFRSF19Q9NS68 423 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 SPRR3Q9UBC9 169 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 ADAM28Q9UKQ2 775 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 CLEC4EQ9ULY5 219 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 OARD1Q9Y530 152 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 FLVCR1Q9Y5Y0 555 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 MAD1L1Q9Y6D9 718 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 ZZEF1O43149 2961 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 CEP295Q9C0D2 2601 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 KNTC1P50748 2209 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 LAMA1P25391 3075 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 DENND4AQ7Z401 1863 aa4.37□□□□□ -1.71
HERC4-213ENST00000506515 GREB1Q4ZG55 1949 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 NBEAQ8NFP9 2946 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 KLF18A0A0U1RQI7 1052 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 SMCO2A6NFE2 343 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 ARL5CA6NH57 179 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 DHRS7CA6NNS2 312 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 PRRG1O14668 218 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 CYTH3O43739 400 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 UGT2B4P06133 528 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 CPN1P15169 458 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 TPSB2P20231 275 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 TBXA2RP21731 343 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 CALB2P22676 271 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 CHI3L1P36222 383 aaPredicted RBP4.36□□□□□ -1.71
HERC4-213ENST00000506515 RPL29P47914 159 aaKnown RBP4.36□□□□□ -1.71
HERC4-213ENST00000506515 IFNAR2P48551 515 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 RGS4P49798 205 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 MRPS11P82912 194 aaKnown RBP4.36□□□□□ -1.71
HERC4-213ENST00000506515 LAGE3Q14657 143 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 TPSAB1Q15661 275 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 SLC5A12Q1EHB4 618 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 PYHIN1Q6K0P9 492 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 KCNIP4Q6PIL6 250 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 SMARCD2Q92925 531 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 SLC25A38Q96DW6 304 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 KIR2DL4Q99706 377 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 TEKT3Q9BXF9 490 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 HEBP1Q9NRV9 189 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 KLHL21Q9UJP4 597 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 NDRG2Q9UN36 371 aaKnown RBP4.36□□□□□ -1.71
HERC4-213ENST00000506515 WDR45Q9Y484 360 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 ALG6Q9Y672 507 aa4.36□□□□□ -1.71
HERC4-213ENST00000506515 URB1O60287 2271 aaKnown RBP4.35□□□□□ -1.71
HERC4-213ENST00000506515 C2orf16Q68DN1 1984 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 IGKV6-21A0A0C4DH24 114 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 A0A0D9SFI3 127 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 MYBPHLA2RUH7 354 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 OR7A17O14581 309 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms