RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TMEM246Q9BRR3 403 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 HDHD3Q9BSH5 251 aaPredicted RBP2.53□□□□□ -2
TOPBP1-204ENST00000505804 CAPS2Q9BXY5 557 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 SLC25A37Q9NYZ2 338 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 CLCF1Q9UBD9 225 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 RAB26Q9ULW5 256 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 TMCO1Q9UM00 188 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 TRAPPC4Q9Y296 219 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 SLC25A15Q9Y619 301 aa2.53□□□□□ -2
TOPBP1-204ENST00000505804 LAD1O00515 517 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 MTX2O75431 263 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 CCT3P49368 545 aaKnown RBP2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 PPOXP50336 477 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 DUSP3P51452 185 aaPredicted RBP2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 CRISP3P54108 245 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 REG3AQ06141 175 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 PSG5Q15238 335 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 EXOC3L2Q2M3D2 409 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 THOC6Q86W42 341 aaKnown RBP2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 ACOT4Q8N9L9 421 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 NPBQ8NG41 125 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 FAM110BQ8TC76 370 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 MAGEE2Q8TD90 523 aaPredicted RBP2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 NPAS2Q99743 824 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 TMEM43Q9BTV4 400 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 PARD6BQ9BYG5 372 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 PLA2G2FQ9BZM2 168 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 CLMPQ9H6B4 373 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 ZFP14Q9HCL3 533 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 IL26Q9NPH9 171 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 BFARQ9NZS9 450 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 DEC1Q9P2X7 70 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 CDH9Q9ULB4 789 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 MMP17Q9ULZ9 603 aa2.52□□□□□ -2.01
TOPBP1-204ENST00000505804 MAP3K15Q6ZN16 1313 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 IGHV3-64DA0A0J9YX35 117 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 ZNF208O43345 1280 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 SNAI2O43623 268 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 ICOSLGO75144 302 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 SPAG6O75602 509 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 TDGF1P13385 188 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 TBPP20226 339 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 GLRA2P23416 452 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 IL12AP29459 219 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 MAGEA8P43361 318 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 TDGF1P3P51864 188 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 CRYBB1P53674 252 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 ATP1B3P54709 279 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 OR5I1Q13606 314 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 KIAA0087Q14695 138 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 KLHL38Q2WGJ6 581 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 ANKDD1AQ495B1 522 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 FILIP1LQ4L180 1135 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 LRRC10Q5BKY1 277 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 PMF1Q6P1K2 205 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 Q6ZPB1 254 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 C6orf120Q7Z4R8 191 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 DHDDSQ86SQ9 333 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 ZNF546Q86UE3 836 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 TRIM69Q86WT6 500 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 FNDC5Q8NAU1 212 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 OR52M1Q8NGK5 317 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 OR5D13Q8NGL4 314 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 ACOT11Q8WXI4 607 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 FAM210BQ96KR6 192 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 RPRD1AQ96P16 312 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 MTMR9Q96QG7 549 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 PELOQ9BRX2 385 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 RIOK2Q9BVS4 552 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 VCX2Q9H322 139 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 SRMSQ9H3Y6 488 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 GIN1Q9NXP7 522 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 STOX2Q9P2F5 926 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 KCNIP3Q9Y2W7 256 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 HEBP2Q9Y5Z4 205 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 ARID1AO14497 2285 aa2.51□□□□□ -2.01
TOPBP1-204ENST00000505804 OR5B21A6NL26 309 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 C12orf71A8MTZ7 269 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 C12orf77C9JDV5 145 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 C11orf94C9JXX5 98 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 TOM1O60784 492 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 PNMA6AP0CW24 399 aaPredicted RBP2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 CMA1P23946 247 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 NMUP48645 174 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 SUCLG1P53597 346 aaKnown RBP2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 UBE2HP62256 183 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 CDK16Q00536 496 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 MADCAM1Q13477 382 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 PDK3Q15120 406 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 CYTH1Q15438 398 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 TFDP3Q5H9I0 405 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 TSPO2Q5TGU0 170 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 LCN12Q6JVE5 192 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 UQCC3Q6UW78 93 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 DUSP18Q8NEJ0 188 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 OR4F15Q8NGB8 312 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 C10orf35Q96D05 121 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 TRIM44Q96DX7 344 aaPredicted RBP2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 COPS8Q99627 209 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms