RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	ZNF239	Q16600	458 aa	Known RBP	13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	MICA	Q29983	383 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	FGD3	Q5JSP0	725 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	CLIP4	Q8N3C7	705 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	OR4D11	Q8NGI4	311 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	ROBO4	Q8WZ75	1007 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	ST8SIA1	Q92185	356 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	TFAP2C	Q92754	450 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	CPNE4	Q96A23	557 aa	Predicted RBP	13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	CNBD2	Q96M20	576 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	PRRC1	Q96M27	445 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	ALPK1	Q96QP1	1244 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	NR1H4	Q96RI1	486 aa	Predicted RBP	13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	ZNF556	Q9HAH1	456 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	GLRX2	Q9NS18	164 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	RHCG	Q9UBD6	479 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	NDRG3	Q9UGV2	375 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	SLC35A3	Q9Y2D2	325 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	EMC9	Q9Y3B6	208 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	FREM1	Q5H8C1	2179 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	ABCA4	P78363	2273 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	GJE1	A6NN92	205 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	SNAP29	O95721	258 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	PLG	P00747	810 aa	Predicted RBP	13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	POU2F1	P14859	743 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	PGC	P20142	388 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	UGT2B10	P36537	528 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	CAPG	P40121	348 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	IL1RL1	Q01638	556 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	LAPTM4A	Q15012	233 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	PDK3	Q15120	406 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	ZIK1	Q3SY52	487 aa	Predicted RBP	13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	MRPL2	Q5T653	305 aa	Known RBP	13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	TTC23	Q5W5X9	447 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	SPNS3	Q6ZMD2	512 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	PLEKHM3	Q6ZWE6	761 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	COMTD1	Q86VU5	262 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	LINC00471	Q8N535	108 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	OR10G2	Q8NGC3	310 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	OR4C15	Q8NGM1	316 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	RNF128	Q8TEB7	428 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	NINJ1	Q92982	152 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	WFIKKN1	Q96NZ8	548 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	KRT84	Q9NSB2	600 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	ST6GALNAC2	Q9UJ37	374 aa		13.13	□□□□□ -0.31
CNBP-208	ENST00000504813	AKAP6	Q13023	2319 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	CDHR4	A6H8M9	788 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	CLDN24	A6NM45	220 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813		H0YAE9	185 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	FAAH	O00519	579 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	FFAR1	O14842	300 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	FRS3	O43559	492 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	HRG	P04196	525 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	AGTR1	P30556	359 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	CTBP2	P56545	445 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	FOXD4	Q12950	439 aa	Predicted RBP	13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	PIN1	Q13526	163 aa	Predicted RBP	13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	GTF2IRD2B	Q6EKJ0	949 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	KRT80	Q6KB66	452 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	C3orf33	Q6P1S2	294 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	GTF2IRD2	Q86UP8	949 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	CMIP	Q8IY22	773 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	ATP6V1C2	Q8NEY4	427 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	ABHD3	Q8WU67	409 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	TMEM234	Q8WY98	164 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	MCHR1	Q99705	422 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	POLR2J2	Q9GZM3	115 aa	Known RBP	13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	POLR2J3	Q9H1A7	115 aa	Known RBP	13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	TOR3A	Q9H497	397 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	PLEKHF2	Q9H8W4	249 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	TIGAR	Q9NQ88	270 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	EXOSC3	Q9NQT5	275 aa	Known RBP	13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	RLIM	Q9NVW2	624 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813	A4GNT	Q9UNA3	340 aa		13.12	□□□□□ -0.31
CNBP-208	ENST00000504813		A0A1W2PNR3	127 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813		A0A1W2PPR1	153 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813		A0A1W2PRQ8	180 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	ARRDC5	A6NEK1	342 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	C16orf97	H3BN30	126 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	DLGAP1	O14490	977 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	ADAM11	O75078	769 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	LIMS1	P48059	325 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	DAP	P51397	102 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	ST3GAL3	Q11203	375 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	DGCR6	Q14129	220 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	NPTX1	Q15818	432 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	SLC36A3	Q495N2	470 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	KDM4D	Q6B0I6	523 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	FAHD1	Q6P587	224 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	OFCC1	Q8IZS5	231 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	DHRS1	Q96LJ7	313 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	WFDC6	Q9BQY6	131 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	ANKRD60	Q9BZ19	345 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	ENOPH1	Q9UHY7	261 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	CHST2	Q9Y4C5	530 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	MED13L	Q71F56	2210 aa		13.11	□□□□□ -0.31
CNBP-208	ENST00000504813	CPSF4L	A6NMK7	179 aa	Known RBP	13.1	□□□□□ -0.31

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