RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 FOXD4Q12950 439 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 SLC17A1Q14916 467 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 POU4F3Q15319 338 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 LINC01559Q495D7 138 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 TMEM201Q5SNT2 666 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 C1orf146Q5VVC0 180 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 TMEM225Q6GV28 225 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 VWA1Q6PCB0 445 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 PODNL1Q6PEZ8 512 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 ZNF730Q6ZMV8 503 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 MBOAT2Q6ZWT7 520 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 BTLAQ7Z6A9 289 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 TUSC5Q8IXB3 177 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 C10orf53Q8N6V4 93 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 CNEP1R1Q8N9A8 125 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 RELL2Q8NC24 303 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 PAPD5Q8NDF8 572 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 PFN4Q8NHR9 129 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 ZNF417Q8TAU3 575 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 LIPHQ8WWY8 451 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 ZNF775Q96BV0 537 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 SGTBQ96EQ0 304 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 ZNF587Q96SQ5 575 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 FUZQ9BT04 418 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 ASPNQ9BXN1 380 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 KCNJ16Q9NPI9 418 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 NANSQ9NR45 359 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 PLSCR4Q9NRQ2 329 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 CCM2LQ9NUG4 571 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 JKAMPQ9P055 326 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 EMC3Q9P0I2 261 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 ZNF229Q9UJW7 825 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 CLEC4AQ9UMR7 237 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 TESMINQ9Y4I5 508 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 ENO4A6NNW6 628 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 LRRN3E7EW58 273 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 MS4A18H0YCH9 400 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 KPNA4O00629 521 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 MSTNO14793 375 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 OR7A10O76100 309 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 CGAP01215 116 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 ASAH2BP0C7U1 165 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 CD8BP10966 210 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 CBLP22681 906 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 RRM2P31350 389 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 SIRPAP78324 504 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 SPIBQ01892 262 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 PMS2P3Q13401 168 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 MS4A18Q3C1V0 323 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 FBXL19-AS1Q494R0 122 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 FGD3Q5JSP0 725 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 OR2T5Q6IEZ7 315 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 RRM2BQ7LG56 351 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 SLC46A3Q7Z3Q1 461 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 NRMQ8IXM6 262 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 OR2T29Q8NH02 315 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 OR5J2Q8NH18 312 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 BPIFA2Q96DR5 249 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 OXGR1Q96P68 337 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 CHID1Q9BWS9 393 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 UCK2Q9BZX2 261 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 FANCFQ9NPI8 374 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 C20orf141Q9NUB4 165 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 C6orf203Q9P0P8 240 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 SEC14L4Q9UDX3 406 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 AURKCQ9UQB9 309 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 KLF2Q9Y5W3 355 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 BAHCC1Q9P281 2608 aa10.58□□□□□ -0.72
PDLIM5-208ENST00000504489 TRBV4-1A0A0J9YWV2 114 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 SH3PXD2BA1X283 911 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 FAM90A27PA6NNH2 459 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 A8MXE2 369 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 PLPP3O14495 311 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 PIP5K1CO60331 668 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 HIST1H2ABP04908 130 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 TSPAN19P0C672 248 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 IFI30P13284 250 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 FUT1P19526 365 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 LIMS1P48059 325 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 ASCL1P50553 236 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 TFF3Q07654 80 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 ZP4Q12836 540 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 CCNIQ14094 377 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 SEC23BQ15437 767 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 ZSCAN26Q16670 478 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 TUSC1Q2TAM9 212 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 TBPL2Q6SJ96 375 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 TMPRSS11FQ6ZWK6 438 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 CREB3L2Q70SY1 520 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 HIST3H2AQ7L7L0 130 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 NUFIP2Q7Z417 695 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 GALNT5Q7Z7M9 940 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 GPAT4Q86UL3 456 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 CDK20Q8IZL9 346 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 LRRC17Q8N6Y2 441 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 ZIC4Q8N9L1 334 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 OR9K2Q8NGE7 335 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 OR52J3Q8NH60 311 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 HPS1Q92902 700 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 HIST1H2ACQ93077 130 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms