RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	ALG10	Q5BKT4	473 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	ZNF57	Q68EA5	555 aa	Predicted RBP	11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	TMEM53	Q6P2H8	277 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	OVCH1	Q7RTY7	1134 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	C9orf40	Q8IXQ3	194 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	PRR22	Q8IZ63	422 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	D2HGDH	Q8N465	521 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	LSM14A	Q8ND56	463 aa	Known RBP	11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	OR4D9	Q8NGE8	314 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	HAVCR2	Q8TDQ0	301 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	UBASH3B	Q8TF42	649 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	PHYHIP	Q92561	330 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	FYTTD1	Q96QD9	318 aa	Known RBP	11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	FOXQ1	Q9C009	403 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	HDHD2	Q9H0R4	259 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	UBE2Z	Q9H832	354 aa	Predicted RBP	11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	RPRD1B	Q9NQG5	326 aa	Known RBP	11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	ABRACL	Q9P1F3	81 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	SEMA5B	Q9P283	1151 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	MRTO4	Q9UKD2	239 aa	Known RBP	11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	ALG5	Q9Y673	324 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	NUP210L	Q5VU65	1888 aa		11.87	□□□□□ -0.51
MATR3-233	ENST00000504203	IDS	B3KWA1	339 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	NUDT21	O43809	227 aa	Known RBP	11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	AHCY	P23526	432 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	TACR3	P29371	465 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	RCVRN	P35243	200 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	DCAF7	P61962	342 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	ZNF117	Q03924	483 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	JAZF1	Q86VZ6	243 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	C10orf53	Q8N6V4	93 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	TSSK2	Q96PF2	358 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	GAL3ST4	Q96RP7	486 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	NRSN2	Q9GZP1	204 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	MOK	Q9UQ07	419 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	CEP192	Q8TEP8	1941 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	ANKRD61	A6NGH8	418 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	FAM171A2	A8MVW0	826 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	T	O15178	435 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	PIN1P1	O15428	100 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	TSPAN2	O60636	221 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	TRIM3	O75382	744 aa	Predicted RBP	11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	SERPINI2	O75830	405 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	F13B	P05160	661 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	SNRPB	P14678	240 aa	Known RBP	11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	SLC6A8	P48029	635 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	NANOS3	P60323	173 aa	Known RBP	11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	RPL18	Q07020	188 aa	Known RBP	11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	PLA1A	Q53H76	456 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	VWA2	Q5GFL6	755 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	UTS2B	Q765I0	119 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	PLXDC1	Q8IUK5	500 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	ZNF511	Q8NB15	262 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	RXFP3	Q9NSD7	469 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	ZNF346	Q9UL40	294 aa	Known RBP	11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	MRPS17	Q9Y2R5	130 aa	Known RBP	11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	FER1L5	A0AVI2	2057 aa		11.86	□□□□□ -0.51
MATR3-233	ENST00000504203	UNC13C	Q8NB66	2214 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203		A0A0B4J203	849 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	DCTN6	O00399	190 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	ORC5	O43913	435 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	CPNE3	O75131	537 aa	Known RBP	11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	FOLR1	P15328	257 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	CSF2RB	P32927	897 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	BTC	P35070	178 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	ZP2	Q05996	745 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	SLC36A2	Q495M3	483 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	MEST	Q5EB52	335 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	EMC4	Q5J8M3	183 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	HACD4	Q5VWC8	232 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	ASB18	Q6ZVZ8	466 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	SLC16A9	Q7RTY1	509 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	TIGD4	Q8IY51	512 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	ZNF563	Q8TA94	476 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	RGP1	Q92546	391 aa	Predicted RBP	11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	TAAR8	Q969N4	342 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	CREB3L1	Q96BA8	519 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	SLC41A2	Q96JW4	573 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	TSPAN32	Q96QS1	320 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	ZNF304	Q9HCX3	659 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	SPATA2	Q9UM82	520 aa		11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	AK6	Q9Y3D8	172 aa	Known RBP	11.85	□□□□□ -0.51
MATR3-233	ENST00000504203	TP53BP1	Q12888	1972 aa	Predicted RBP	11.85	□□□□□ -0.51
MATR3-233	ENST00000504203		A0A1B0GVT2	93 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203		A0A1W2PQD3	144 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	FAM172BP	A6NC97	362 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	ALG1L2	C9J202	215 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	EEF1E1	O43324	174 aa	Known RBP	11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	UBL3	O95164	117 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	GRPR	P30550	384 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	ARL4D	P49703	201 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	SMAD2	Q15796	467 aa	Known RBP	11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	HSD17B12	Q53GQ0	312 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	SLC6A19	Q695T7	634 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	NOXA1	Q86UR1	476 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	SLC35F3	Q8IY50	421 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	TCTE3	Q8IZS6	198 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	C7orf57	Q8NEG2	295 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	GFI1	Q99684	422 aa		11.84	□□□□□ -0.51
MATR3-233	ENST00000504203	BEX2	Q9BXY8	128 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms