RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 C22orf42Q6IC83 251 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 REEP3Q6NUK4 255 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 UNQ9370/PRO34162Q6UXP9 181 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ZNF621Q6ZSS3 439 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 RNF44Q7L0R7 432 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SSX7Q7RTT5 188 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TRMT1LQ7Z2T5 733 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 CTU1Q7Z7A3 348 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 HS3ST5Q8IZT8 346 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 BEST3Q8N1M1 668 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 HDDC3Q8N4P3 179 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SLC30A7Q8NEW0 376 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OR2D3Q8NGH3 330 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OR5K2Q8NHB8 316 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 COQ8AQ8NI60 647 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 STT3BQ8TCJ2 826 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 LINGO1Q96FE5 620 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SLC35A4Q96G79 324 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MS4A4EQ96PG1 132 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 FAM193BQ96PV7 902 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 EFCAB11Q9BUY7 163 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 DPH1Q9BZG8 443 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SLC39A8Q9C0K1 460 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 FXYD6Q9H0Q3 95 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 FBXO44Q9H4M3 255 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 CCDC86Q9H6F5 360 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 WDCPQ9H6R7 721 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 IPPKQ9H8X2 491 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 LMAN1LQ9HAT1 526 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 NEUROD4Q9HD90 331 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TREM1Q9NP99 234 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 KCNJ16Q9NPI9 418 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 EXOSC3Q9NQT5 275 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 SIRT7Q9NRC8 400 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 GPATCH2LQ9NWQ4 482 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 LAMP5Q9UJQ1 280 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 GOLT1BQ9Y3E0 138 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TIMM10BQ9Y5J6 103 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 A0A1W2PN81 502 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OR2M5A3KFT3 312 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MGAT4DA6NG13 374 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 PRSS47A8MTI9 375 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TISP43B9A030 160 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ZNF587BE7ETH6 402 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MAGEB4O15481 346 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 BCL2L11O43521 198 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 FBXO24O75426 580 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 CLDN9O95484 217 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MPC2O95563 127 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 RCC1P18754 421 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 LPOP22079 712 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 CHI3L1P36222 383 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 CHRNA7P36544 502 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 FEN1P39748 380 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 FHITP49789 147 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 P2RY4P51582 365 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 RAP1BP61224 184 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 CDK6Q00534 326 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 PRKCZQ05513 592 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 CRYZQ08257 329 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 ECH1Q13011 328 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ZNF235Q14590 738 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 LAPTM4AQ15012 233 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ZNHIT3Q15649 155 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 CHRFAM7AQ494W8 412 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 PDLIM3Q53GG5 364 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 TMEM31Q5JXX7 168 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 THEM4Q5T1C6 240 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 LIPKQ5VXJ0 399 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 C12orf73Q69YU5 71 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 CES3Q6UWW8 571 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 PHACTR4Q8IZ21 702 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OR13C3Q8NGS6 347 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OR10R2Q8NGX6 335 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OR4L1Q8NH43 312 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 STK35Q8TDR2 534 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 WFIKKN1Q96NZ8 548 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ARHGAP9Q9BRR9 750 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 NDC1Q9BTX1 674 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TSSK6Q9BXA6 273 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 GSX1Q9H4S2 264 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 ZNF768Q9H5H4 540 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 SFXN1Q9H9B4 322 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SEMA4BQ9NPR2 832 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 FAM212BQ9NTI7 297 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 NKIRAS2Q9NYR9 191 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 GALPQ9UBC7 116 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MRTO4Q9UKD2 239 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 ITPR2Q14571 2701 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 GPR39O43194 453 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 TSPAN2O60636 221 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 HPGDSO60760 199 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 SPP1P10451 314 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 SLC25A4P12235 298 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 TIMP2P16035 220 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 IGFBP2P18065 325 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 MAOAP21397 527 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 GIFP27352 417 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 GPR15P49685 360 aa2.55□□□□□ -2
NEDD4-204ENST00000503468 SULT1E1P49888 294 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms