RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 EXD3Q8N9H8 876 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 CYB561A3Q8NBI2 242 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC37A3Q8NCC5 494 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 LSM14AQ8ND56 463 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 NPEPL1Q8NDH3 523 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF540Q8NDQ6 660 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF248Q8NDW4 579 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 FAM83FQ8NEG4 500 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 ANKK1Q8NFD2 765 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 OR5J2Q8NH18 312 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 MFSD8Q8NHS3 518 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF519Q8TB69 540 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 FAR1Q8WVX9 515 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 HAS2Q92819 552 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 PTP4A1Q93096 173 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC25A36Q96CQ1 311 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 RASD2Q96D21 266 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 Q96M85 177 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 C5orf34Q96MH7 638 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 AGAP4Q96P64 663 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 ERMAPQ96PL5 475 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC38A2Q96QD8 506 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 FAM173AQ9BQD7 235 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 COPS4Q9BT78 406 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 POTEKPQ9BYX7 375 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 TTTY12Q9BZ98 90 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 NMNAT2Q9BZQ4 307 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 FN3KQ9H479 309 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 PTGES2Q9H7Z7 377 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 ZFP64Q9NPA5 681 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 KLHL1Q9NR64 748 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 CLN6Q9NWW5 311 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 MRPL39Q9NYK5 338 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 CNOT2Q9NZN8 540 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 ABI3Q9P2A4 366 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 B3GAT1Q9P2W7 334 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 DKKL1Q9UK85 242 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 BLOC1S6Q9UL45 172 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 BAIAP2Q9UQB8 552 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 TPRKBQ9Y3C4 175 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 PCDHGB1Q9Y5G3 927 aa6.2□□□□□ -1.42
TOPBP1-203ENST00000503464 A0A0J9YW62 118 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 OR6C68A6NDL8 312 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 FAM166BA8MTA8 275 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 FAM47E-STBD1D6RA91 191 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 C11orf98E9PRG8 122 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 J3QRE1 110 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 DCTN6O00399 190 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 CDK2AP1O14519 115 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 RGS10O43665 173 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 INMTO95050 263 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 AKR7A3O95154 331 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 APOL3O95236 402 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 FADS2O95864 444 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 PLGP00747 810 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 IGHMP01871 453 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 PDGFAP04085 211 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 HMGN1P05114 100 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 GYPBP06028 91 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 LCKP06239 509 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 TFPIP10646 304 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 APEHP13798 732 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 HTR1FP30939 366 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 SFTPDP35247 375 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 IDUAP35475 653 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 CDKN2AP42771 156 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 MEOX1P50221 254 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 TNFSF10P50591 281 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 MAP2K6P52564 334 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 NR1H2P55055 460 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 GP2P55259 537 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 GFRA1P56159 465 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 CTXN1P60606 82 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 CSNK2BP67870 215 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 EMX1Q04741 257 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 RUNX1T1Q06455 604 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 ST3GAL4Q11206 333 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 PMS2P3Q13401 168 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 NEDD8Q15843 81 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF239Q16600 458 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 HYAL4Q2M3T9 481 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 TMEM176BQ3YBM2 270 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 ANKDD1AQ495B1 522 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 WIPI1Q5MNZ9 446 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 ARMC4Q5T2S8 1044 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 RAET1LQ5VY80 246 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 MEDAGQ5VYS4 303 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 NXNL2Q5VZ03 156 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC25A25Q6KCM7 469 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 PAQR6Q6TCH4 344 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 TRILQ7L0X0 811 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 SHFQ7M4L6 423 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 PRSS48Q7RTY5 328 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 GALNTL5Q7Z4T8 443 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 GGNQ86UU5 652 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 SPACA3Q8IXA5 215 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 GHDCQ8N2G8 530 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 KDM8Q8N371 416 aa6.19□□□□□ -1.42
TOPBP1-203ENST00000503464 TMEM251Q8N6I4 163 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms