RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 CLDN20P56880 219 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 ERVK-25P63136 954 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 SRSF5Q13243 272 aaKnown RBP10.92□□□□□ -0.66
NUP54-202ENST00000502850 EBPQ15125 230 aaKnown RBP10.92□□□□□ -0.66
NUP54-202ENST00000502850 TBRG1Q3YBR2 411 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 HSD17B12Q53GQ0 312 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 ARHGAP40Q5TG30 622 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 TIGD3Q6B0B8 471 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 C5orf46Q6UWT4 87 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 SSX6Q7RTT6 188 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 DEFB119Q8N690 84 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 MOSPD2Q8NHP6 518 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 ZNF721Q8TF20 911 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 SLC7A6Q92536 515 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 RASD2Q96D21 266 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 SLC41A2Q96JW4 573 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 WACQ9BTA9 647 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 ALG12Q9BV10 488 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 ZCCHC4Q9H5U6 513 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 GRHPRQ9UBQ7 328 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 SRPK3Q9UPE1 567 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 TMEM14AQ9Y6G1 99 aa10.92□□□□□ -0.66
NUP54-202ENST00000502850 FAM172BPA6NC97 362 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 OR6C68A6NDL8 312 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 ALG1L2C9J202 215 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 BLOC1S5-TXNDC5H3BN57 136 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 TOX3O15405 576 aaPredicted RBP10.91□□□□□ -0.66
NUP54-202ENST00000502850 ITGA10O75578 1167 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 SLC25A12O75746 678 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 ZNF432O94892 652 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 UBL3O95164 117 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 CXCR1P25024 350 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 MAOBP27338 520 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 AQP2P41181 271 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 OR1D4P47884 311 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 PNLIPRP2P54317 469 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 CTXN1P60606 82 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 PLCXD2Q0VAA5 305 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 CBFBQ13951 182 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 NKAIN2Q5VXU1 208 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 WDR74Q6RFH5 385 aaPredicted RBP10.91□□□□□ -0.66
NUP54-202ENST00000502850 FAM122BQ7Z309 247 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 MISPQ8IVT2 679 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 LRRC75AQ8NAA5 344 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 GATSQ8NAP1 163 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 LSM14AQ8ND56 463 aaKnown RBP10.91□□□□□ -0.66
NUP54-202ENST00000502850 OR4M1Q8NGD0 313 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 C1orf216Q8TAB5 229 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 DNASE2BQ8WZ79 361 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 CLIP3Q96DZ5 547 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 GAL3ST4Q96RP7 486 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 ADOQ96SZ5 270 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 C7orf50Q9BRJ6 194 aaKnown RBP10.91□□□□□ -0.66
NUP54-202ENST00000502850 TBL1XR1Q9BZK7 514 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 ADAM19Q9H013 955 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 SLITRK2Q9H156 845 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 B3GAT2Q9NPZ5 323 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 AKAP7Q9P0M2 348 aaPredicted RBP10.91□□□□□ -0.66
NUP54-202ENST00000502850 ZNF281Q9Y2X9 895 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 HEATR5AQ86XA9 2040 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 TRAV36DV7A0A075B6V5 113 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 A0A0G2JMP0 313 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 A0A0X1KG70 313 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 LRRN3E7EW58 273 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 RGS13O14921 159 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 SDC3O75056 442 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 GP1BBP13224 206 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 TACR3P29371 465 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 BLVRAP53004 296 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 OR1D5P58170 312 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 BTG1P62324 171 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 MRPS15P82914 257 aaKnown RBP10.91□□□□□ -0.66
NUP54-202ENST00000502850 NSDHLQ15738 373 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 UNQ9370/PRO34162Q6UXP9 181 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 RPTNQ6XPR3 784 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 ASCL5Q7RTU5 278 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 CDH24Q86UP0 819 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 NR2C2APQ86WQ0 139 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 C1orf210Q8IVY1 113 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 OR4M2Q8NGB6 313 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 OR1N1Q8NGS0 311 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 OR1L3Q8NH93 324 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 UBASH3BQ8TF42 649 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 ADAMTS14Q8WXS8 1223 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 TSLPQ969D9 159 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 ST6GAL2Q96JF0 529 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 MARVELD1Q9BSK0 173 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 THAP7Q9BT49 309 aaPredicted RBP10.91□□□□□ -0.66
NUP54-202ENST00000502850 TRAF4Q9BUZ4 470 aaPredicted RBP10.91□□□□□ -0.66
NUP54-202ENST00000502850 WWTR1Q9GZV5 400 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 LRRN3Q9H3W5 708 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 ACOXLQ9NUZ1 547 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 COPZ2Q9P299 210 aa10.91□□□□□ -0.66
NUP54-202ENST00000502850 PTPRZ1P23471 2315 aaPredicted RBP10.9□□□□□ -0.66
NUP54-202ENST00000502850 OR2W5A6NFC9 320 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 A8MUA0 341 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 BCAT2O15382 392 aaPredicted RBP10.9□□□□□ -0.66
NUP54-202ENST00000502850 HCRTR2O43614 444 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 NDUFB5O43674 189 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 SELENOFO60613 162 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms