RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ZNF229Q9UJW7 825 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 MED31Q9Y3C7 131 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 FREM1Q5H8C1 2179 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 A0A087WUU8 490 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 MS4A18H0YCH9 400 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 FABP3P05413 133 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 ASAH2BP0C7U1 165 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 CD79BP40259 229 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 MS4A18Q3C1V0 323 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 NHLRC1Q6VVB1 395 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 BEND4Q6ZU67 534 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 CREB3L2Q70SY1 520 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 STK32CQ86UX6 486 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 KIF18BQ86Y91 864 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 EPHX4Q8IUS5 362 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 C10orf53Q8N6V4 93 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 OR5J2Q8NH18 312 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 SLC7A13Q8TCU3 470 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 MCUR1Q96AQ8 359 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 ZNF385AQ96PM9 386 aaKnown RBP22.25■■□□□ 1.15
LSM6-202ENST00000502781 MMADHCQ9H3L0 296 aaPredicted RBP22.25■■□□□ 1.15
LSM6-202ENST00000502781 MAGIXQ9H6Y5 334 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 NANSQ9NR45 359 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 C6orf203Q9P0P8 240 aaPredicted RBP22.25■■□□□ 1.15
LSM6-202ENST00000502781 SLC7A8Q9UHI5 535 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 POMPQ9Y244 141 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 AQP12BA6NM10 295 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 PLPP3O14495 311 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 DIRAS1O95057 198 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 H1F0P07305 194 aaKnown RBP22.25■■□□□ 1.15
LSM6-202ENST00000502781 PEX19P40855 299 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 FAM27E3Q08E93 113 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 AQP12AQ8IXF9 295 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 RNF113BQ8IZP6 322 aaKnown RBP22.25■■□□□ 1.15
LSM6-202ENST00000502781 GABRG1Q8N1C3 465 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 KDM8Q8N371 416 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 LRRC17Q8N6Y2 441 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 FUZQ9BT04 418 aa22.25■■□□□ 1.15
LSM6-202ENST00000502781 MRPL33O75394 65 aaKnown RBP22.24■■□□□ 1.15
LSM6-202ENST00000502781 CNOT4O95628 575 aaKnown RBP22.24■■□□□ 1.15
LSM6-202ENST00000502781 HPRP00739 348 aa22.24■■□□□ 1.15
LSM6-202ENST00000502781 FOXD4Q12950 439 aaPredicted RBP22.24■■□□□ 1.15
LSM6-202ENST00000502781 PMS2P3Q13401 168 aa22.24■■□□□ 1.15
LSM6-202ENST00000502781 MEX3BQ6ZN04 569 aaKnown RBP22.24■■□□□ 1.15
LSM6-202ENST00000502781 ZDHHC21Q8IVQ6 265 aa22.24■■□□□ 1.15
LSM6-202ENST00000502781 SGTBQ96EQ0 304 aa22.24■■□□□ 1.15
LSM6-202ENST00000502781 SEPHS2Q99611 448 aa22.24■■□□□ 1.15
LSM6-202ENST00000502781 TRIM15Q9C019 465 aa22.24■■□□□ 1.15
LSM6-202ENST00000502781 PARPBPQ9NWS1 579 aa22.24■■□□□ 1.15
LSM6-202ENST00000502781 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.24■■□□□ 1.15
LSM6-202ENST00000502781 EBAG9O00559 213 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 PIP5K1CO60331 668 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 OR7A10O76100 309 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 STAMBPO95630 424 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 POU2F1P14859 743 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 ZNF43P17038 809 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 CCKARP32238 428 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 PRKCDQ05655 676 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 PUDPQ08623 228 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 ZP4Q12836 540 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 Q6ZT83 130 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 CCDC121Q6ZUS5 278 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 ASRGL1Q7L266 308 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 NRMQ8IXM6 262 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 ZNF100Q8IYN0 542 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 APH1AQ96BI3 265 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 LRGUKQ96M69 825 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 ZNF347Q96SE7 839 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 TAS2R5Q9NYW4 299 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 PRSS50Q9UI38 385 aa22.23■■□□□ 1.15
LSM6-202ENST00000502781 TRAF3IP2O43734 574 aaPredicted RBP22.22■■□□□ 1.15
LSM6-202ENST00000502781 TSPAN19P0C672 248 aa22.22■■□□□ 1.15
LSM6-202ENST00000502781 NQO1P15559 274 aaKnown RBP22.22■■□□□ 1.15
LSM6-202ENST00000502781 FUT1P19526 365 aa22.22■■□□□ 1.15
LSM6-202ENST00000502781 FLOT2Q14254 428 aa22.22■■□□□ 1.15
LSM6-202ENST00000502781 EXOC3L2Q2M3D2 409 aa22.22■■□□□ 1.15
LSM6-202ENST00000502781 TBPL2Q6SJ96 375 aa22.22■■□□□ 1.15
LSM6-202ENST00000502781 STAC2Q6ZMT1 411 aa22.22■■□□□ 1.15
LSM6-202ENST00000502781 MBOAT2Q6ZWT7 520 aa22.22■■□□□ 1.15
LSM6-202ENST00000502781 BPIFA2Q96DR5 249 aa22.22■■□□□ 1.15
LSM6-202ENST00000502781 MALT1Q9UDY8 824 aa22.22■■□□□ 1.15
LSM6-202ENST00000502781 TRBV4-1A0A0J9YWV2 114 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 COX6B1P14854 86 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 UGT2B10P36537 528 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 SMIM11AP58511 58 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 FBXW9Q5XUX1 488 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 PODNL1Q6PEZ8 512 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 CASP12Q6UXS9 341 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 ZNF730Q6ZMV8 503 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.21■■□□□ 1.15
LSM6-202ENST00000502781 PXKQ7Z7A4 578 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 ADGRG5Q8IZF4 528 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 SLC24A3Q9HC58 644 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 RCE1Q9Y256 329 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 TESMINQ9Y4I5 508 aa22.21■■□□□ 1.15
LSM6-202ENST00000502781 UNC79Q9P2D8 2635 aa22.2■■□□□ 1.14
LSM6-202ENST00000502781 ZNF432O94892 652 aa22.2■■□□□ 1.14
LSM6-202ENST00000502781 IFI30P13284 250 aa22.2■■□□□ 1.14
LSM6-202ENST00000502781 HLA-DOBP13765 273 aa22.2■■□□□ 1.14
LSM6-202ENST00000502781 PSMB1P20618 241 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms