RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-218	ENST00000502357	ZNF418	Q8TF45	676 aa	Predicted RBP	10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	TRNT1	Q96Q11	434 aa	Known RBP	10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	LRRC37B	Q96QE4	947 aa		10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	RBM4	Q9BWF3	364 aa	Known RBP	10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	RSPO3	Q9BXY4	272 aa	Predicted RBP	10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	LPAR2	Q9HBW0	351 aa		10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	GPR35	Q9HC97	309 aa		10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	ZNF275	Q9NSD4	429 aa	Predicted RBP	10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	RLIM	Q9NVW2	624 aa		10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	ZNF224	Q9NZL3	707 aa		10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	SLC17A7	Q9P2U7	560 aa		10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	SEC14L4	Q9UDX3	406 aa		10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	USP22	Q9UPT9	525 aa		10.86	□□□□□ -0.67
LMNA-218	ENST00000502357	DSPP	Q9NZW4	1301 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	LOC105371242	A0A075B767	164 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	PRSS51	A0A1B0GVH4	220 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	CFAP73	A6NFT4	308 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	TRIM77	I1YAP6	450 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	SYNGR3	O43761	229 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	VAMP5	O95183	116 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	TF	P02787	698 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	ZNF14	P17017	642 aa	Predicted RBP	10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	ACHE	P22303	614 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	ARR3	P36575	388 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	GPR6	P46095	362 aa	Predicted RBP	10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	MVD	P53602	400 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	SH3BGR	P55822	239 aa	Predicted RBP	10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	SNTB2	Q13425	540 aa	Known RBP	10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	DAG1	Q14118	895 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	TMEM225	Q6GV28	225 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	KRT80	Q6KB66	452 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	LRRC74B	Q6ZQY2	392 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	TMEM123	Q8N131	208 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	KDM8	Q8N371	416 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	CCDC63	Q8NA47	563 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	NARFL	Q9H6Q4	476 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	MOV10	Q9HCE1	1003 aa	Known RBP	10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	REV1	Q9UBZ9	1251 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	PCDHGB1	Q9Y5G3	927 aa		10.85	□□□□□ -0.67
LMNA-218	ENST00000502357	VWF	P04275	2813 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	CDHR4	A6H8M9	788 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357		A8MVM7	634 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	ZNF500	O60304	480 aa	Predicted RBP	10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	PNP	P00491	289 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	TFPT	P0C1Z6	253 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	GKN3P	P0CG01	181 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	SAG	P10523	405 aa	Predicted RBP	10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	PNMT	P11086	282 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	PRG2	P13727	222 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	TCN1	P20061	433 aa	Predicted RBP	10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	LIMS1	P48059	325 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	TMEM33	P57088	247 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	MRPS11	P82912	194 aa	Known RBP	10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	SMU1	Q2TAY7	513 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	CEACAM16	Q2WEN9	425 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	GPAT3	Q53EU6	434 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	ATAD3B	Q5T9A4	648 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	C1orf140	Q5VVS0	124 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	ZNF627	Q7L945	461 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	C1QL2	Q7Z5L3	287 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	RIBC1	Q8N443	379 aa	Predicted RBP	10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	EPS8L3	Q8TE67	593 aa	Known RBP	10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	RDH5	Q92781	318 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	DVL3	Q92997	716 aa	Predicted RBP	10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	TESC	Q96BS2	214 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	TUBGCP3	Q96CW5	907 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	MS4A3	Q96HJ5	214 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	MTHFD2L	Q9H903	347 aa	Predicted RBP	10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	CRLF2	Q9HC73	371 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	DYNLRB1	Q9NP97	96 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	ADPRHL2	Q9NX46	363 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	OPN4	Q9UHM6	478 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	PRDM4	Q9UKN5	801 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	RCE1	Q9Y256	329 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	RASD1	Q9Y272	281 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	GRIP1	Q9Y3R0	1128 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	CMAHP	Q9Y471	501 aa		10.84	□□□□□ -0.67
LMNA-218	ENST00000502357	TRAV20	A0A0B4J274	112 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	KRT33A	O76009	404 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	CPSF4	O95639	269 aa	Known RBP	10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	GSN	P06396	782 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	ERCC1	P07992	297 aa	Predicted RBP	10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	GLRX	P35754	106 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	ALDH3B1	P43353	468 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	CLDN17	P56750	224 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	DEFA6	Q01524	100 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	NPRL3	Q12980	569 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	MAD2L1BP	Q15013	274 aa	Predicted RBP	10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	COX20	Q5RI15	118 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	ZNF836	Q6ZNA1	936 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	RNF130	Q86XS8	419 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	GSPT2	Q8IYD1	628 aa	Known RBP	10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	CLIP4	Q8N3C7	705 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	IL17RD	Q8NFM7	739 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	OR51F2	Q8NH61	342 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	MFSD8	Q8NHS3	518 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	RNF217	Q8TC41	542 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	LRRC58	Q96CX6	371 aa		10.83	□□□□□ -0.68
LMNA-218	ENST00000502357	FAHD2A	Q96GK7	314 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms