RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 DHFR2Q86XF0 187 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 GABRG1Q8N1C3 465 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 ZIC4Q8N9L1 334 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 SCAIQ8N9R8 606 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 OR5J2Q8NH18 312 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 MCUR1Q96AQ8 359 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 TMEM45BQ96B21 275 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 ASB9Q96DX5 294 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 C7orf34Q96L11 122 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 FKRPQ9H9S5 495 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 NANSQ9NR45 359 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 MAN2C1Q9NTJ4 1040 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 MRPL39Q9NYK5 338 aaKnown RBP14.84□□□□□ -0.03
PRKCB-210ENST00000498739 NDUFAF4Q9P032 175 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 B3GAT1Q9P2W7 334 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 KCNN3Q9UGI6 736 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 NDRG3Q9UGV2 375 aa14.84□□□□□ -0.03
PRKCB-210ENST00000498739 DIRAS1O95057 198 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 FABP3P05413 133 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 ITGA2P17301 1181 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 RHCEP18577 417 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 MTX3Q5HYI7 312 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 FBXW9Q5XUX1 488 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 ANKRD34AQ69YU3 496 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 Q6ZT83 130 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 SLC46A3Q7Z3Q1 461 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 EPHX4Q8IUS5 362 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 ZNF295-AS1Q8N0V1 137 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 LRRC17Q8N6Y2 441 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 PIK3C3Q8NEB9 887 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 FAM222BQ8WU58 562 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 SGTBQ96EQ0 304 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 SEPHS2Q99611 448 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 NMNAT1Q9HAN9 279 aaPredicted RBP14.83□□□□□ -0.04
PRKCB-210ENST00000498739 C20orf141Q9NUB4 165 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 ZNF229Q9UJW7 825 aa14.83□□□□□ -0.04
PRKCB-210ENST00000498739 SPTBN1Q01082 2364 aaKnown RBP14.82□□□□□ -0.04
PRKCB-210ENST00000498739 TCRBV5S2A0A599 114 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 SH3D21A4FU49 640 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 C11orf98E9PRG8 122 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 MS4A18H0YCH9 400 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 PLPP3O14495 311 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 SERPINI2O75830 405 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 DNAJC8O75937 253 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-210ENST00000498739 OR7A10O76100 309 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 OR6A2O95222 327 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 HPRP00739 348 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 HIST1H2ABP04908 130 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 H1F0P07305 194 aaKnown RBP14.82□□□□□ -0.04
PRKCB-210ENST00000498739 ADORA3P0DMS8 318 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 IFI30P13284 250 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 AHCYP23526 432 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 SELENOPP49908 381 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 CLDN17P56750 224 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 LSM11P83369 360 aaKnown RBP eCLIP14.82□□□□□ -0.047e-8■■■■■ 28.9
PRKCB-210ENST00000498739 POU3F1Q03052 451 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-210ENST00000498739 PUDPQ08623 228 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 FAPQ12884 760 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 TSC22D1Q15714 1073 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 MS4A18Q3C1V0 323 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 FGD3Q5JSP0 725 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 NIPAL3Q6P499 406 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 ZNF730Q6ZMV8 503 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 HIST3H2AQ7L7L0 130 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 NANOGNBQ7Z5D8 188 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 UEVLDQ8IX04 471 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 ACOT11Q8WXI4 607 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-210ENST00000498739 HIST1H2ACQ93077 130 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 LRGUKQ96M69 825 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 MED18Q9BUE0 208 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 UPB1Q9UBR1 384 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 GPR52Q9Y2T5 361 aa14.82□□□□□ -0.04
PRKCB-210ENST00000498739 LOC102725191A0A1B0GVB3 256 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 ATP5HO75947 161 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 LYZL6O75951 148 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 CNOT4O95628 575 aaKnown RBP14.81□□□□□ -0.04
PRKCB-210ENST00000498739 IGF2P01344 180 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 ASAH2BP0C7U1 165 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 EPXP11678 715 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 HLA-DOBP13765 273 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 PRF1P14222 555 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 FUT1P19526 365 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 PSMB1P20618 241 aaKnown RBP14.81□□□□□ -0.04
PRKCB-210ENST00000498739 IL32P24001 234 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 RASSF2P50749 326 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 CBX1P83916 185 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 TLE4Q04727 773 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 ITGADQ13349 1161 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 P2RY6Q15077 328 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 SFRP5Q5T4F7 317 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 TSPO2Q5TGU0 170 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 ZDHHC21Q8IVQ6 265 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 NRMQ8IXM6 262 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 KISS1RQ969F8 398 aaPredicted RBP14.81□□□□□ -0.04
PRKCB-210ENST00000498739 C14orf79Q96F83 325 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 ZC3HAV1LQ96H79 300 aaKnown RBP14.81□□□□□ -0.04
PRKCB-210ENST00000498739 DACH2Q96NX9 599 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 WFIKKN1Q96NZ8 548 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 PIP5K1AQ99755 562 aa14.81□□□□□ -0.04
PRKCB-210ENST00000498739 ACTR6Q9GZN1 396 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms