RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 LOC102725191A0A1B0GVB3 256 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 A0A1W2PPR1 153 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 OR6C65A6NJZ3 312 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 LRRN3E7EW58 273 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 FZD7O75084 574 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 OR5F1O95221 314 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 OR6A2O95222 327 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 LYPD3O95274 346 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 ZNF682O95780 498 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 FAM107AO95990 144 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 CH25HO95992 272 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 AHCYP23526 432 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 SELENOPP49908 381 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 FOXG1P55316 489 aaPredicted RBP11.28□□□□□ -0.6
HSPG2-213ENST00000498495 MXRA7P84157 204 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 TGFBR3Q03167 851 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 KEAP1Q14145 624 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 PPA1Q15181 289 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 C9orf135Q5VTT2 229 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 GLYATQ6IB77 296 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 WDR88Q6ZMY6 472 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 FKBP9P1Q75LS8 142 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 CBLL1Q75N03 491 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 ABHD12BQ7Z5M8 362 aaPredicted RBP11.28□□□□□ -0.6
HSPG2-213ENST00000498495 TSPYL5Q86VY4 417 aaPredicted RBP11.28□□□□□ -0.6
HSPG2-213ENST00000498495 UEVLDQ8IX04 471 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 SCAIQ8N9R8 606 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 ADPRHL1Q8NDY3 354 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 MUS81Q96NY9 551 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 MOGAT1Q96PD6 335 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 PRSS27Q9BQR3 290 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 SLC19A3Q9BZV2 496 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 ESRP2Q9H6T0 727 aaKnown RBP11.28□□□□□ -0.6
HSPG2-213ENST00000498495 CCM2LQ9NUG4 571 aaPredicted RBP11.28□□□□□ -0.6
HSPG2-213ENST00000498495 ARL8BQ9NVJ2 186 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 MRPL39Q9NYK5 338 aaKnown RBP11.28□□□□□ -0.6
HSPG2-213ENST00000498495 B3GAT1Q9P2W7 334 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 PLEKHA6Q9Y2H5 1048 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 ITPR2Q14571 2701 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 OR5H1A6NKK0 313 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 KPNA4O00629 521 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-213ENST00000498495 AKAP8O43823 692 aaKnown RBP11.27□□□□□ -0.61
HSPG2-213ENST00000498495 SERPINA1P01009 418 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 RAF1P04049 648 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 HIST1H2ABP04908 130 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 ITGA5P08648 1049 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 ADORA3P0DMS8 318 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 THRBP10828 461 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 UMPSP11172 480 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 NCK1P16333 377 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 CDH2P19022 906 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-213ENST00000498495 MPGP29372 298 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 MNAT1P51948 309 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 ST3GAL3Q11203 375 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 GABRA6Q16445 453 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 ZNF74Q16587 644 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 IFI44LQ53G44 452 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 HIST3H2AQ7L7L0 130 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 VTCN1Q7Z7D3 282 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 NKAIN4Q8IVV8 208 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 PGAM4Q8N0Y7 254 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 RNF148Q8N7C7 305 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 CCDC197Q8NCU1 140 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 OR5J2Q8NH18 312 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 OR52N5Q8NH56 324 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 HIST1H2ACQ93077 130 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 HS6ST2Q96MM7 605 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 NANSQ9NR45 359 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 NDE1Q9NXR1 346 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 FAM53CQ9NYF3 392 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 EGFL7Q9UHF1 273 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 RPS6KA6Q9UK32 745 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 ADAM21Q9UKJ8 722 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 FBN2P35556 2912 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 NAV2Q8IVL1 2488 aa11.27□□□□□ -0.61
HSPG2-213ENST00000498495 ZNF726A6NNF4 738 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 ZNF587BE7ETH6 402 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 PDLIM1O00151 329 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 PLPP3O14495 311 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 SLC43A1O75387 559 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 UPK3AO75631 287 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 MT-ND1P03886 318 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 IFNW1P05000 195 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 CD3EP07766 207 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 LOXP28300 417 aaPredicted RBP11.26□□□□□ -0.61
HSPG2-213ENST00000498495 RBM34P42696 430 aaKnown RBP11.26□□□□□ -0.61
HSPG2-213ENST00000498495 YAP1P46937 504 aaKnown RBP11.26□□□□□ -0.61
HSPG2-213ENST00000498495 ART1P52961 327 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 SLC25A3Q00325 362 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 PUDPQ08623 228 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 KRT72Q14CN4 511 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 ACKR1Q16570 336 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 NCMAPQ5T1S8 102 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 HMBOX1Q6NT76 420 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 C16orf89Q6UX73 402 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 PAMR1Q6UXH9 720 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 PXKQ7Z7A4 578 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 FITM2Q8N6M3 262 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 TMEM239Q8WW34 195 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms