RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 SPATA5L1Q9BVQ7 753 aa10.27□□□□□ -0.77
NUDCD3-211ENST00000497978 LINC00470Q9BZP3 86 aa10.27□□□□□ -0.77
NUDCD3-211ENST00000497978 PAIP1Q9H074 479 aaKnown RBP10.27□□□□□ -0.77
NUDCD3-211ENST00000497978 CHST2Q9Y4C5 530 aa10.27□□□□□ -0.77
NUDCD3-211ENST00000497978 FKBP7Q9Y680 259 aa10.27□□□□□ -0.77
NUDCD3-211ENST00000497978 POLR3GO15318 223 aaPredicted RBP10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 OR2T1O43869 369 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 GPRIN2O60269 458 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 TGDSO95455 350 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 PNMTP11086 282 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 BMP2P12643 396 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 PPIBP23284 216 aaKnown RBP10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 PRKAR1BP31321 381 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 MRPL19P49406 292 aaKnown RBP10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 CLDN17P56750 224 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 SNRPD2P62316 118 aaKnown RBP10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 HOXC5Q00444 222 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 IL1RL1Q01638 556 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 C1DQ13901 141 aaKnown RBP10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 TMEM249Q2WGJ8 235 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 CHRFAM7AQ494W8 412 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 GCNT6Q5T4J0 391 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 ANKRD16Q6P6B7 361 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 KRT73Q86Y46 540 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 EPHX4Q8IUS5 362 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 SPATA3Q8NHX4 192 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 MAGEE2Q8TD90 523 aaPredicted RBP10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 PROX1Q92786 737 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 BCL2L2Q92843 193 aaPredicted RBP10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 SLC38A4Q969I6 547 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 FBXO17Q96EF6 278 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 C7orf26Q96N11 449 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 OXGR1Q96P68 337 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 KATNB1Q9BVA0 655 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 C12orf10Q9HB07 376 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 TCF7L2Q9NQB0 619 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 SELENONQ9NZV5 590 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 RCE1Q9Y256 329 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 ZANQ9Y493 2812 aa10.26□□□□□ -0.77
NUDCD3-211ENST00000497978 A0A096LNT2 108 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 ARPC4-TTLL3A0A0A6YYG9 625 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 IGHV1-18A0A0C4DH31 117 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 VSTM5A8MXK1 200 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 FTCDNL1E5RQL4 147 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 AIM2O14862 343 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 AKAP8O43823 692 aaKnown RBP10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 SLC43A1O75387 559 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 UPK3AO75631 287 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 USF1P22415 310 aaPredicted RBP10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 SERPINF1P36955 418 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 PDLIM4P50479 330 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 NCALDP61601 193 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 VLDLRP98155 873 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 ROR2Q01974 943 aaKnown RBP10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 LGALS3BPQ08380 585 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 SWI5Q1ZZU3 235 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 C3orf36Q3SXR2 165 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 C6orf52Q5T4I8 152 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 FAM69AQ5T7M9 428 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 CYB5R2Q6BCY4 276 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 REEP3Q6NUK4 255 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 C6orf89Q6UWU4 347 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 SLC46A3Q7Z3Q1 461 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 NET1Q7Z628 596 aaPredicted RBP10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 KDM8Q8N371 416 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 GPR137CQ8N3F9 429 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 LSMEM1Q8N8F7 131 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 NFKBIDQ8NI38 313 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 LRRC8CQ8TDW0 803 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 C10orf105Q8TEF2 133 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 DNAJA4Q8WW22 397 aaPredicted RBP10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 KTI12Q96EK9 354 aaPredicted RBP10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 PTDSS2Q9BVG9 487 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 SLC13A4Q9UKG4 626 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 CORO2BQ9UQ03 480 aa10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 SONP18583 2426 aaKnown RBP10.25□□□□□ -0.77
NUDCD3-211ENST00000497978 A0A096LPE4 126 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 A0A1W2PPZ6 126 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 PRORSD1PA6NEY8 169 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 EVPLLA8MZ36 301 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 B9A039 149 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 RPL36A-HNRNPH2H7BZ11 118 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 NR5A2O00482 541 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 PDE5AO76074 875 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 ARAFP10398 606 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 CDK6Q00534 326 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 EGR4Q05215 589 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 MFSD13AQ14CX5 517 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 MST1LQ2TV78 715 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 ALG10BQ5I7T1 473 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 BEND6Q5SZJ8 279 aaPredicted RBP10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 LRIF1Q5T3J3 769 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 AGBL2Q5U5Z8 902 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 ULK3Q6PHR2 472 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 DHRS4L2Q6PKH6 230 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 H1FNTQ75WM6 255 aaPredicted RBP10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 LINGO2Q7L985 606 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 FAM169BQ8N8A8 192 aa10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 BHLHE22Q8NFJ8 381 aaPredicted RBP10.24□□□□□ -0.77
NUDCD3-211ENST00000497978 OR4F15Q8NGB8 312 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms