RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 MRPL39Q9NYK5 338 aaKnown RBP12.76□□□□□ -0.37
VPS26A-209ENST00000497564 SLC6A5Q9Y345 797 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 LIPT2A6NK58 231 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 ARPC3O15145 178 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 SURF4O15260 269 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 IDH3BO43837 385 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 HIST1H2ABP04908 130 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 IMPDH2P12268 514 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 APEHP13798 732 aaKnown RBP12.75□□□□□ -0.37
VPS26A-209ENST00000497564 GDF1P27539 372 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 GRPRP30550 384 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 UQCRFS1P47985 274 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 RAC1P63000 192 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 CSNK2BP67870 215 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 SPTAN1Q13813 2472 aaKnown RBP12.75□□□□□ -0.37
VPS26A-209ENST00000497564 ZNF239Q16600 458 aaKnown RBP12.75□□□□□ -0.37
VPS26A-209ENST00000497564 HIST3H2AQ7L7L0 130 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 CCDC103Q8IW40 242 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 FAM26EQ8N5C1 309 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 ADPRHL1Q8NDY3 354 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 OR5M1Q8NGP8 315 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 CNIH3Q8TBE1 160 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 CPT1CQ8TCG5 803 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 HIST1H2ACQ93077 130 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 UBE2FQ969M7 185 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 ARL5BQ96KC2 179 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 IFT27Q9BW83 186 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 FANCFQ9NPI8 374 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 NRIP3Q9NQ35 241 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 KLHL1Q9NR64 748 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 PLCXD1Q9NUJ7 323 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 ALKBH4Q9NXW9 302 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 TVP23BQ9NYZ1 205 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 TRAPPC4Q9Y296 219 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 B3GNT3Q9Y2A9 372 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 DOPEY2Q9Y3R5 2298 aa12.75□□□□□ -0.37
VPS26A-209ENST00000497564 USP9YO00507 2555 aaPredicted RBP12.74□□□□□ -0.37
VPS26A-209ENST00000497564 SH3D21A4FU49 640 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 GJE1A6NN92 205 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 MCIDASD6RGH6 385 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 H3BML4 177 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 SLC1A7O00341 560 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 IMPA2O14732 288 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 PRKYO43930 277 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 TFPIP10646 304 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 PEPDP12955 493 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 CRHBPP24387 322 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 GFRA1P56159 465 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 GABARAPL2P60520 117 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 RPL18Q07020 188 aaKnown RBP12.74□□□□□ -0.37
VPS26A-209ENST00000497564 ZP4Q12836 540 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 MYBPHQ13203 477 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 SNAPC1Q16533 368 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 OCLNQ16625 522 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 MEDAGQ5VYS4 303 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 ARHGAP11AQ6P4F7 1023 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 Q6ZS92 163 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 SLC22A16Q86VW1 577 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 TCEANCQ8N8B7 351 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 OR14L1PQ8NHC6 308 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 MOSPD2Q8NHP6 518 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 TMEM163Q8TC26 289 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 Q96MT0 163 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 TAPBPLQ9BX59 468 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 ASPNQ9BXN1 380 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 FN3KQ9H479 309 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 CMC2Q9NRP2 79 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 RASSF1Q9NS23 344 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 IL20RAQ9UHF4 553 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 BLOC1S6Q9UL45 172 aa12.74□□□□□ -0.37
VPS26A-209ENST00000497564 RPH3AQ9Y2J0 694 aaPredicted RBP12.74□□□□□ -0.37
VPS26A-209ENST00000497564 HIVEP3Q5T1R4 2406 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 SVILO95425 2214 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 BLOC1S5-TXNDC5H3BN57 136 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 M0R082 166 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 ACOT7O00154 380 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 PLPP3O14495 311 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 DNPH1O43598 174 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 PPP1R3DO95685 299 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 PMS2P2O95744 297 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 TXNDC12O95881 172 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 CD14P08571 375 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 TCEA1P23193 301 aaKnown RBP12.73□□□□□ -0.37
VPS26A-209ENST00000497564 SHC1P29353 583 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 AQP2P41181 271 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 PLGLB1Q02325 96 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 SRSF1Q07955 248 aaKnown RBP eCLIP12.73□□□□□ -0.37
VPS26A-209ENST00000497564 TOMM20Q15388 145 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 ALG10Q5BKT4 473 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 TMPPEQ6ZT21 453 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.73□□□□□ -0.37
VPS26A-209ENST00000497564 YRDCQ86U90 279 aaKnown RBP12.73□□□□□ -0.37
VPS26A-209ENST00000497564 ZADH2Q8N4Q0 377 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 CISD2Q8N5K1 135 aaKnown RBP12.73□□□□□ -0.37
VPS26A-209ENST00000497564 TMEM251Q8N6I4 163 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 FAM98AQ8NCA5 519 aaKnown RBP12.73□□□□□ -0.37
VPS26A-209ENST00000497564 ATP6V1C2Q8NEY4 427 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 ZNF417Q8TAU3 575 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 SLC25A36Q96CQ1 311 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 SNRNP40Q96DI7 357 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms