RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 ARMCX1Q9P291 453 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 RCE1Q9Y256 329 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 PRAMEF27A3QJZ7 478 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 ZNF503-AS2A6NEH8 195 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 AGAP5A6NIR3 686 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 A8MVM7 634 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 RIPK2O43353 540 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 PLPP2O43688 288 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 TRIM13O60858 407 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 SCN2BO60939 215 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 NPIPB7O75200 414 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 MPZL1O95297 269 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 FSHBP01225 129 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 UQCRBP14927 111 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 ADRA2CP18825 462 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 UQCRC2P22695 453 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 CXCR1P25024 350 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 FPR2P25090 351 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 ARF1P84077 181 aaKnown RBP11.52□□□□□ -0.57
COL1A1-209ENST00000495677 KRT80Q6KB66 452 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 CLECL1Q8IZS7 167 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 BPIFB2Q8N4F0 458 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 OR8J2Q8NGG1 315 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 RAB8BQ92930 207 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 DVL3Q92997 716 aaPredicted RBP11.52□□□□□ -0.57
COL1A1-209ENST00000495677 DENND2DQ9H6A0 471 aaPredicted RBP11.52□□□□□ -0.57
COL1A1-209ENST00000495677 NARFLQ9H6Q4 476 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 ZNF665Q9H7R5 613 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 MID2Q9UJV3 735 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 PYCARDQ9ULZ3 195 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 TANC2Q9HCD6 1990 aa11.52□□□□□ -0.57
COL1A1-209ENST00000495677 CFAP73A6NFT4 308 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 PPIHO43447 177 aaKnown RBP11.51□□□□□ -0.57
COL1A1-209ENST00000495677 NPHS1O60500 1241 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 DEAF1O75398 565 aaPredicted RBP11.51□□□□□ -0.57
COL1A1-209ENST00000495677 SKAP2O75563 359 aaPredicted RBP11.51□□□□□ -0.57
COL1A1-209ENST00000495677 TFPTP0C1Z6 253 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 RPS4Y1P22090 263 aaKnown RBP11.51□□□□□ -0.57
COL1A1-209ENST00000495677 PRTN3P24158 256 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 SEC24CP53992 1094 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 NPRL3Q12980 569 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 FXNQ16595 210 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 MIDNQ504T8 468 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 ZNF311Q5JNZ3 666 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 SAXO2Q658L1 398 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 MDP1Q86V88 176 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 C10orf107Q8IVU9 208 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 ZNF440Q8IYI8 595 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 CLEC4FQ8N1N0 589 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 CCDC63Q8NA47 563 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 FNDC5Q8NAU1 212 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 RNF217Q8TC41 542 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 LRRC58Q96CX6 371 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 RAB39BQ96DA2 213 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 NEURL3Q96EH8 262 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 C3orf30Q96M34 536 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 TRNT1Q96Q11 434 aaKnown RBP11.51□□□□□ -0.57
COL1A1-209ENST00000495677 SLC38A1Q9H2H9 487 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 MTHFD2LQ9H903 347 aaPredicted RBP11.51□□□□□ -0.57
COL1A1-209ENST00000495677 ZMAT3Q9HA38 289 aaKnown RBP11.51□□□□□ -0.57
COL1A1-209ENST00000495677 GPR35Q9HC97 309 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 ADPRHL2Q9NX46 363 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 GIMAP2Q9UG22 337 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 TBK1Q9UHD2 729 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 WNK1Q9H4A3 2382 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 DSPPQ9NZW4 1301 aa11.51□□□□□ -0.57
COL1A1-209ENST00000495677 CMYA5Q8N3K9 4069 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 PRKDCP78527 4128 aaKnown RBP11.5□□□□□ -0.57
COL1A1-209ENST00000495677 A0A096LPI6 279 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 ZNF99A8MXY4 864 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-209ENST00000495677 FRS3O43559 492 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 FZD7O75084 574 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 CHRM4P08173 479 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 IL7RP16871 459 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 ZNF14P17017 642 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-209ENST00000495677 TCN1P20061 433 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-209ENST00000495677 IL13RA1P78552 427 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 TXNL4AP83876 142 aaKnown RBP11.5□□□□□ -0.57
COL1A1-209ENST00000495677 MAD2L1Q13257 205 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-209ENST00000495677 GNA13Q14344 377 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 PCLAFQ15004 111 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 SMU1Q2TAY7 513 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 GPAT3Q53EU6 434 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 PRAMEF8Q5VWM4 474 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 PRAMEF7Q5VXH5 474 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 OR4F3Q6IEY1 312 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 TNFAIP8L2Q6P589 184 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-209ENST00000495677 SYT10Q6XYQ8 523 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 LRRC74BQ6ZQY2 392 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 ZNF627Q7L945 461 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 MFSD8Q8NHS3 518 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 STK35Q8TDR2 534 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 ZNF837Q96EG3 531 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-209ENST00000495677 C1orf50Q9BV19 199 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 MED29Q9NX70 200 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 ASIC5Q9NY37 505 aa11.5□□□□□ -0.57
COL1A1-209ENST00000495677 ZNF346Q9UL40 294 aaKnown RBP11.5□□□□□ -0.57
COL1A1-209ENST00000495677 LOC102725191A0A1B0GVB3 256 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 PRSS51A0A1B0GVH4 220 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 TMEM233B4DJY2 109 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms