RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TMEM108Q6UXF1 575 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 LSRQ86X29 649 aaPredicted RBP15.53■□□□□ 0.08
HDAC4-211ENST00000494800 P3H2Q8IVL5 708 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 OR52N5Q8NH56 324 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 LZICQ8WZA0 190 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 AKAP1Q92667 903 aaKnown RBP eCLIP15.53■□□□□ 0.08
HDAC4-211ENST00000494800 RADILQ96JH8 1075 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 WFDC6Q9BQY6 131 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 POLR2J2Q9GZM3 115 aaKnown RBP15.53■□□□□ 0.08
HDAC4-211ENST00000494800 PCDHAC1Q9H158 963 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 POLR2J3Q9H1A7 115 aaKnown RBP15.53■□□□□ 0.08
HDAC4-211ENST00000494800 AMDHD2Q9Y303 409 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 MAGED1Q9Y5V3 778 aaPredicted RBP15.53■□□□□ 0.08
HDAC4-211ENST00000494800 LOC102725191A0A1B0GVB3 256 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 GMNCA6NCL1 334 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 PDLIM1O00151 329 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 TMCC2O75069 709 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 SLC43A1O75387 559 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 CBLP22681 906 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 IFNA8P32881 189 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 LSP1P33241 339 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 SELENOPP49908 381 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 CLDN17P56750 224 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 PMS2P3Q13401 168 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 NPTX1Q15818 432 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 C9orf135Q5VTT2 229 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 ADAM5Q6NVV9 412 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 CARM1Q86X55 608 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 EPHX4Q8IUS5 362 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 UEVLDQ8IX04 471 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 MICU2Q8IYU8 434 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 KDM8Q8N371 416 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 ZNF611Q8N823 705 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 TMEM171Q8WVE6 324 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 FBXW5Q969U6 566 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 SLC19A3Q9BZV2 496 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 CXorf56Q9H5V9 222 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 SLC7A7Q9UM01 511 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 MGAT4BQ9UQ53 548 aa15.52■□□□□ 0.08
HDAC4-211ENST00000494800 GSTA4O15217 222 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 OR6A2O95222 327 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 WNT11O96014 354 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 PLAUP00749 431 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 CDH2P19022 906 aaPredicted RBP15.51■□□□□ 0.07
HDAC4-211ENST00000494800 PAX7P23759 505 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 PTAFRP25105 342 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 KDELR2P33947 212 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 NUDT2P50583 147 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 TAS2R41P59536 307 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 HMBOX1Q6NT76 420 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 LINC00114Q6XXX2 140 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 TGIF2LYQ8IUE0 185 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 RBM45Q8IUH3 476 aaKnown RBP15.51■□□□□ 0.07
HDAC4-211ENST00000494800 LRRC75A-AS1Q8N1F1 130 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 DEPDC4Q8N2C3 294 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 GPR137CQ8N3F9 429 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 PIK3C3Q8NEB9 887 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 LINC00470Q9BZP3 86 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 AMBRA1Q9C0C7 1298 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 MRPL39Q9NYK5 338 aaKnown RBP15.51■□□□□ 0.07
HDAC4-211ENST00000494800 SEC14L4Q9UDX3 406 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 SLC25A15Q9Y619 301 aa15.51■□□□□ 0.07
HDAC4-211ENST00000494800 DPRXA6NFQ7 191 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 SNX3O60493 162 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 BGLAPP02818 100 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 HIST1H2ABP04908 130 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 CRYBA2P53672 197 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 SH3BGRP55822 239 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-211ENST00000494800 PRPS1P60891 318 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 GNGT1P63211 74 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 NKX6-1P78426 367 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-211ENST00000494800 LIPEQ05469 1076 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 PUDPQ08623 228 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 CYBRD1Q53TN4 286 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 SHEQ5VZ18 495 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 HACD2Q6Y1H2 254 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 DEF8Q6ZN54 512 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 HIST3H2AQ7L7L0 130 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 ANKK1Q8NFD2 765 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 OR4D11Q8NGI4 311 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 HIST1H2ACQ93077 130 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 SLC41A3Q96GZ6 507 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 TPD52L3Q96J77 140 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 ALKBH3Q96Q83 286 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-211ENST00000494800 OBP2BQ9NPH6 170 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 SLC17A5Q9NRA2 495 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 FAIMQ9NVQ4 179 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 CMTM6Q9NX76 183 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 B3GAT1Q9P2W7 334 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 NOX1Q9Y5S8 564 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 ABCA4P78363 2273 aa15.5■□□□□ 0.07
HDAC4-211ENST00000494800 A0A1W2PR80 420 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 ABCD4O14678 606 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 OR5F1O95221 314 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 CD99P14209 185 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 PTNP21246 168 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 DRD4P21917 467 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 AHCYP23526 432 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 PRDX6P30041 224 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 ZNF83P51522 516 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms